KEGG   Rattus norvegicus (rat): 25109
Entry
25109             CDS       T01003                                 
Symbol
Cd1d1
Name
(RefSeq) antigen-presenting glycoprotein CD1d precursor
  KO
K06448  T-cell surface glycoprotein CD1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04530  Tight junction
rno04640  Hematopoietic cell lineage
rno05146  Amoebiasis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    25109 (Cd1d1)
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    25109 (Cd1d1)
 09160 Human Diseases
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    25109 (Cd1d1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:rno04090]
    25109 (Cd1d1)
CD molecules [BR:rno04090]
 Proteins
  25109 (Cd1d1)
SSDB
Motif
Pfam: MHC_I_3 C1-set MHC_I Phage_holin_3_6
Other DBs
NCBI-GeneID: 25109
NCBI-ProteinID: NP_058775
RGD: 2296
Ensembl: ENSRNOG00000016451
UniProt: Q63493
Position
2:complement(174721522..174725029)
AA seq 336 aa
MLYLPCLLLWAFPQFWGQSEVQQNYTFGCLQISSFANRSWSRTDSVVWLGDLQTHRWSND
SDTISFTKPWSQGKFSNQQWEKLQHMFQVYRTSFTRDIKEIVKMMSPKEDYPIEVQLSAG
CEMYPGNASESFLHVAFQGEYVVRFHGTSWQKVPEAPSWLDLPIKMLNADEGTRETVQIL
LNDTCPQFVRGLLEAGKPDLEKQEKPVAWLSRGPNPAHGHLQLVCHVSGFHPKPVWVMWM
RGDQEQGGTHRGDILPNADETWYLQATLDVEAGDEAGLACRVKHSSLEGQDIILYWGGRQ
VSPVLIFLIVGVLVLVVCAVAYYIIRKRRRSYQDIM
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgctgtacctaccgtgcctgttgctgtgggcattcccacagttctggggacaatccgaa
gtccagcagaattacaccttcggctgcctgcagatctcttccttcgccaaccgaagctgg
tcccgcacagacagtgtggtctggctgggggatctgcagacacaccgttggagtaatgac
tcagacaccatcagcttcacaaagccgtggtcccagggcaaattcagtaaccagcagtgg
gagaagttgcagcatatgtttcaagtgtatcgaaccagctttaccagggacatcaaggaa
atagtcaaaatgatgtcacctaaagaagactatcctatcgaggtccaactgtctgctggc
tgtgaaatgtaccctgggaatgcttcagaaagctttttacacgtagcatttcaaggagaa
tatgtcgtgagattccatggaacatcctggcagaaggtcccagaggccccatcttggtta
gatttgcccatcaaaatgctcaacgctgatgaaggaacgagagaaacagtgcagatactc
ctgaacgacacctgcccccagtttgtccgtggcctcctagaagcagggaagccagaccta
gaaaagcaagagaagccagtggcctggttatcccgtggccccaaccctgcccatggccat
ctgcagctggtatgtcatgtctctggcttccacccaaagcctgtgtgggtgatgtggatg
cggggtgaccaggagcaagggggtactcacagaggtgacatcctgccaaatgcggatgag
acatggtatcttcaagcaaccctggatgtggaggctggagacgaggctggcctggcctgc
agggtgaagcacagcagtctagaggggcaggacatcatcctctactggggtggcagacaa
gtatccccggtgttgatcttcttgatagtaggcgtactggttctagtggtgtgtgctgtg
gcctactatatcatcaggaaaaggagacgctcctatcaagacatcatgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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