KEGG   Rattus norvegicus (rat): 25130
Entry
25130             CDS       T01003                                 
Symbol
Stx2
Name
(RefSeq) syntaxin-2 isoform 1
  KO
K08486  syntaxin 1B/2/3
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04130  SNARE interactions in vesicular transport
rno04721  Synaptic vesicle cycle
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    25130 (Stx2)
 09150 Organismal Systems
  09156 Nervous system
   04721 Synaptic vesicle cycle
    25130 (Stx2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    25130 (Stx2)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    25130 (Stx2)
Membrane trafficking [BR:rno04131]
 SNARE
  Syntaxin (Qa)
   Stx-PM
    25130 (Stx2)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   25130 (Stx2)
  Exosomal proteins of other body fluids (saliva and urine)
   25130 (Stx2)
SSDB
Motif
Pfam: Syntaxin SNARE Syntaxin_2 ETRAMP Syntaxin-6_N DUF6161 DUF3671 DUF16 ApoLp-III Tlp CwsA DUF2116 DUF2205 Med28 Relaxase_C
Other DBs
NCBI-GeneID: 25130
NCBI-ProteinID: NP_036880
RGD: 2558
Ensembl: ENSRNOG00000000936
UniProt: P50279
Position
12:33315447..33350788
AA seq 290 aa
MRDRLPDLTACRKSDDGDNAVIITVEKDHFMDAFFHQVEEIRSSIARIAQHVEDVKKNHS
IILSAPNPEGKIKEELEDLNKEIKKTANRIRGKLKAIEQSCDQDENGNRTSVDLRIRRTQ
HSVLSRKFVDVMTEYNEAQILFRERSKGRIQRQLEITGRTTTDEELEEMLESGKPSIFIS
DIISDSQITRQALNEIESRHKDIMKLETSIRELHEMFMDMAMFVETQGEMVNNIERNVVN
SVDYVEHAKEETKKAIKYQSKARRKKWIIAAVVVAVIAVLALIIGLSVGK
NT seq 873 nt   +upstreamnt  +downstreamnt
atgcgggaccggctgccggacctcacggcgtgtaggaaaagcgacgatggagacaatgct
gtcatcatcacggtggagaaggaccacttcatggatgccttcttccatcaggtggaggag
attcgaagcagcatagccaggattgctcagcacgtggaggatgtgaagaagaaccacagc
atcatcctctctgccccaaacccagaaggaaaaataaaagaagagctggaggacctgaac
aaagagatcaagaaaactgctaacaggatccggggcaagctgaaggctattgagcagagt
tgtgatcaggacgagaatgggaaccgaacttcagtggatctgcggatacgaaggacccag
cactcagtgctgtcacggaagtttgtggacgtcatgacagaatacaatgaagcacagatc
ctgtttcgggagcgaagcaaaggccgaatccagcgccagctagagatcactgggaggacc
accactgacgaggagctggaggagatgctggagagcgggaagccgtccatcttcatctcg
gacattatatcagattcacagattactaggcaagctctcaatgagatcgagtcacgccac
aaagacatcatgaagctggagaccagcatccgagagctgcacgagatgttcatggatatg
gccatgtttgtcgagactcagggtgaaatggtcaacaacattgagagaaacgtggtgaac
tccgtagattacgtggagcacgccaaggaagagactaagaaagccatcaaataccagagc
aaggccagacggaaaaagtggataattgctgctgtggtggtggctgtcattgctgtcctg
gctctaatcattggcttgtcggttggcaaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (10)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (8)   
DNA sequence (16)   
   RefSeq(nuc) (8)   
   GenBank (4)   
   EMBL (4)   
Protein domain (15)   
   Pfam (15)   
All databases (53)   

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