KEGG   Rattus norvegicus (rat): 25132
Entry
25132             CDS       T01003                                 
Symbol
Myo5b
Name
(RefSeq) unconventional myosin-Vb
  KO
K10357  myosin V
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    25132 (Myo5b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    25132 (Myo5b)
   04131 Membrane trafficking [BR:rno04131]
    25132 (Myo5b)
   03029 Mitochondrial biogenesis [BR:rno03029]
    25132 (Myo5b)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    25132 (Myo5b)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Cargo complex
     25132 (Myo5b)
   mRNA cycle factors
    P-body specific factors
     25132 (Myo5b)
Membrane trafficking [BR:rno04131]
 Others
  Actin-binding proteins
   Myosins
    25132 (Myo5b)
Mitochondrial biogenesis [BR:rno03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Retention of mitochondria
    25132 (Myo5b)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Myosins
     25132 (Myo5b)
SSDB
Motif
Pfam: Myosin_head DIL IQ nSTAND3 Myosin_N AAA_16 AAA_22
Other DBs
NCBI-GeneID: 25132
NCBI-ProteinID: NP_058779
RGD: 621347
Ensembl: ENSRNOG00000014104
UniProt: P70569
Position
18:70313717..70613918
AA seq 1846 aa
MSYSELYSRYTRVWIPDPDEVWRSAELTKDYKDGDESLQLRLEDDTILDYPIDVQNNQVP
FLRNPDILVGENDLTALSHLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYEQLPIYG
QDVIYAYSGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRYF
ATVGGSASDTNIEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIEIGFDKKYHIIGANMR
TYLLEKSRVVFQADDERNYHIFYQLCAAASLPEFKELALTCAEDFFYTAHGGNTTIEGVD
DAEDFEKTRQALTLLGVRESHQISIFKIIASILHLGSVEIQAERDGDSCSISPQDEHLSN
FCRLLGIEHSQMEHWLCHRKLVTTSETYVKTMSLQQVVNARNALAKHIYAQLFSWIVEHI
NKALQTSLKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNSHVFKLEQEEYMK
EQIPWTLIDFYDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWAQKLYERHSNSQHFQK
PRMSNTAFIVIHFADKVEYLSDGFLEKNRDTVYEEQINILKASKFPLVADLFRDDKDSVP
ATNTAKSRSSSKINVRSSRPLMKAPNKEHKKSVGYQFRTSLNLLMETLNATTPHYVRCIK
PNDEKLPFHFDPKRAVQQLRACGVLETIRISAAGYPSRWTYHDFFNRYRVLMKKRELANT
TDKKNICKSVLESLIKDPDKFQFGRTKIFFRAGQVAYLEKLRADKFREATIMIQKTVRGW
LQRVKYRRLRAATLTLQRFCRGYLARRLTEHLRRTRAAIVFQKQYRMLKARRAYCRVRRA
AVIIQSYTRAMCVRRSYRQVLTEHKATIIQKYARGWMARRHFQRQRDAAIVIQCAFRRLK
ARQALKALKIEARSAEHLKRLNVGMENKVVQLQRKIDDQNKEFKTLSEQLSAVTSTHAME
VEKLKKELARYQQNQEADPSLQLQEEVQSLRTELQKAHSERRVLEDTHNRENGELRKRVA
DLEHENALLKDEKEHLNNQILRQSKAESSQSSVEENLLIKKELEEERSRYQNLVKEYSQL
EQRYENLRDEQQTPGHRKNPSNQSSLESDSNYPSISTSEIGDTEDALQQVEEIGIEKAAM
DMTVFLKLQKRVRELEQERKKLQVQLEKEQQDSKKVQVEQQNNGLDVDQDADIAYNSLKR
QELESENKKLKNDLNELRKAVADQAMQDNSTHSSPDSYSLLLNQLKLANEELEVRKEEVL
ILRTQIMNADQRRLSGKNMEPNINARTSWPNSEKHVDQEDAIEAYHGVCQTNSQTEDWGY
LNEDGELGLAYQGLKQVARLLEAQLQAQNLKHEEEVEHLKAQVEAMKEEMDKQQQTFCQT
LLLSPEAQVEFGVQQEISRLTNENLDFKELVEKLEKNEKKLKKQLKIYMKKVQDLEAAQA
LAQSDRRHHELTRQVTVQRKEKDFQGMLEYHKEDEALLIRNLVTDLKPQMLSGTVPCLPA
YILYMCIRHADYTNDDLKVHSLLSSTINGIKKVLKKHNEDFEMTSFWLSNTCRLLHCLKQ
YSGDEGFMTQNTAKQNEHCLKNFDLTEYRQVLSDLSIQIYQQLIKIAEGLLQPMIVSAML
ENESIQGLSGVRPTGYRKRSSSMVDGENSYCLEAIIRQMNFFHTVLCDQGLDPEIILQVF
KQLFYMINAVTLNNLLLRKDACSWSTGMQLRYNISQLEEWLRGKNLQQSGAVQTMEPLIQ
AAQLLQLKKKTQEDAEAICSLCTSLSTQQIVKILNLYTPLNEFEERVTVSFIRTIQAQLQ
ERSDPQQLLLDSKHMFPVLFPFNPSALTMDSIHIPACLNLEFLNEV
NT seq 5541 nt   +upstreamnt  +downstreamnt
atgtcgtacagcgagctctacagccggtacacgagggtctggatccccgacccagatgag
gtgtggcgctcggctgaactaaccaaggactacaaagatggggatgagagcctacaactc
agactggaagatgacacaattctggattacccaatcgatgtccaaaataaccaggtgcca
ttcttgcggaatccagatatcttagtaggagaaaacgacctcactgcactcagccatctc
cacgagcccgcagttctgcataacttaaaggtccgtttcctggagtctaaccacatctac
acttactgtggaattgtgcttgttgccattaatccctatgagcagctgccaatctacggg
caggatgtcatctatgcctacagtggccaaaatatgggcgacatggatccccacatcttt
gctgtagcagaagaagcctacaagcagatggccagagatgaaaagaaccaatccatcata
gtcagcggagagtctggagcagggaagaccgtgtcagccaagtatgccatgcgctatttt
gccacagttgggggctcagccagtgataccaacatcgaagagaaggtcctggcttccagt
cccatcatggaggccatcgggaatgccaagacaactcgcaacgacaatagcagccgattt
gggaagtacattgagatcggctttgataaaaagtaccacatcatcggggccaacatgagg
acctatttgctggagaagtccagggtggtctttcaggcggatgatgagaggaactaccac
atcttttaccagctctgtgctgcggccagccttcctgagtttaaggagctcgcactaaca
tgtgcagaggactttttctacaccgcccatggaggaaacacgaccatcgagggtgtagat
gatgcagaggactttgagaagacaagacaagccctcacactccttggagttcgggagtcc
catcaaatcagcatctttaagataattgcttctatcttgcaccttggaagtgtggagatc
caggccgagcgggatggggactcctgcagcatatcgccccaggacgaacacctgagcaac
ttctgccgcctgctaggaatagagcacagtcagatggagcactggctgtgtcatcggaag
ctggtcaccacctccgagacctacgtcaagaccatgtccctgcagcaagtggtcaacgca
cgcaatgccttggccaagcacatctatgcccagctgttctcctggattgtggagcacatc
aacaaggccctgcaaacctcccttaaacaacactccttcatcggggtcctggatatttat
gggtttgagaccttcgagattaatagcttcgagcagttttgtatcaactatgccaacgaa
aagctccagcaacagttcaactcgcatgtgttcaagctggagcaagaagagtatatgaag
gagcagatcccgtggaccttgattgacttctatgataaccaaccgtgcatagacctcata
gaagccaagctgggtatcctggacctgttggatgaggagtgtaaggtccccaaaggaact
gatcagaactgggctcagaaactctatgaacggcactccaacagtcaacacttccagaaa
ccacgcatgtccaacacggccttcattgtcatccactttgcagacaaggtggaatacctt
tcagatggttttctggagaaaaacagggacacggtatatgaagaacagatcaacatcctg
aaagccagcaagtttccactagtggctgatttgttccgtgatgacaaggactctgttcct
gccaccaacacagctaagagtcggtcatcttcaaagatcaatgttcgttcttccagaccc
ctcatgaaggcccccaacaaggagcacaagaaatccgtgggctaccagttccgcacttcc
ctaaacctgcttatggagactctgaatgccacaacgccacactacgttcgatgcatcaag
cccaacgacgaaaagctccccttccacttcgacccaaagagagctgtgcagcagctcaga
gcctgcggcgtgttggagaccattcggatcagcgcggcaggctacccgtccaggtggacc
taccatgacttcttcaaccggtatcgggtgttgatgaagaagagagagcttgccaacacc
accgacaagaagaatatctgcaagtctgtcctggagagtctcatcaaggatccagacaag
ttccagtttggccgcaccaagatcttcttccgggcaggtcaggtggcctacctggagaag
cttcgggcagacaagttccgggaggccaccatcatgatccaaaagacggtcaggggctgg
ctgcagagagtgaagtaccggaggctgagagcagctacgctaaccctgcagagattctgc
cgaggatacttagcccgcagactgactgagcacttgaggagaacccgggcggccatagtg
ttccagaagcagtaccgcatgctgaaggcccgccgagcctactgcagggtccgcagggct
gcggtcatcatccagtcctacacgagggccatgtgtgtacgcagaagctaccgccaggtc
ctcacggagcacaaagccaccatcatccagaagtacgcccggggctggatggcacggaga
cattttcagcggcagcgggatgcagccattgtcatccagtgtgccttccggaggctcaag
gccaggcaggcactgaaggccctcaagatcgaggcccgttctgcagagcatctgaaacgc
ctcaacgtgggcatggagaacaaagttgtccagctgcagcggaagattgatgaccagaac
aaagagttcaagactctgtcagagcagttgtctgcagttacctccacccatgccatggag
gtggagaagctgaagaaggagctggcgcgttaccagcagaaccaggaggctgaccccagc
cttcagctgcaggaggaggtacagagcctgcgcaccgaactacagaaggctcattcggag
cgcagggtcctagaggatactcacaacagggagaatggtgaactgagaaagcgagtcgca
gacctggaacatgaaaatgcactcttgaaggatgagaaagaacaccttaacaaccaaatc
ctgcgccagtcaaaagctgaatcttcacagagctctgtggaggaaaacctgctgattaag
aaggaactggaggaggaacggtcccggtaccagaacctcgtgaaggagtactcccagctg
gagcagagatatgagaaccttcgggacgagcagcaaactccaggccacaggaagaaccca
tcaaatcaaagtagcttagaatctgactccaattacccctccatttccacctcagaaatc
ggagacaccgaggatgccctacagcaggtggaggagattggtatagagaaggcagccatg
gacatgactgtcttcttgaagctgcagaagagagtgcgggaacttgagcaggagaggaag
aagctgcaggtgcagctagaaaaggaacaacaggacagcaagaaagtgcaggtagaacaa
caaaacaatggcctagatgtggaccaggatgcagatatagcctacaatagtctgaagaga
caagagctcgagtcagagaacaagaagctgaagaatgatctgaatgagctgcggaaggct
gtagccgaccaagccatgcaggataactccactcatagctcccccgacagctacagcctc
ctactgaaccagctcaagctggccaacgaggagctggaggtccgcaaagaggaggtgctg
atcctcaggacccagatcatgaatgctgaccagcgcagactgtccggcaagaacatggag
ccgaacatcaatgccagaacaagttggcccaacagcgagaagcacgtggaccaggaagat
gccattgaggcctatcacggggtctgccagacaaacagccagactgaggattggggatat
ttgaatgaagatggagaactcggcttggcttaccaaggcctaaagcaagtcgccaggttg
ctggaggcccagctgcaggcccagaacctgaagcatgaggaggaggtggagcatctcaag
gcccaggtggaggccatgaaggaggagatggacaaacagcagcagaccttctgccagact
ctgctgctctccccagaggcccaggtagaatttggtgtccagcaggagatatcccggctg
accaatgagaacctggactttaaggagttggtggaaaagctggagaagaatgagaagaag
ctgaaaaagcagctgaagatttacatgaagaaggtccaggacttagaagctgcccaggca
ttggcacagagtgacaggaggcaccatgaactcacaagacaggtcacggtccaacgaaaa
gagaaggacttccaaggcatgctggagtaccacaaagaggacgaggcactccttatccgg
aacctggtgacagacctgaagccccagatgctgtcgggcaccgtgccctgtctgcctgca
tacatactctacatgtgcatcaggcacgcggactacaccaacgatgacctcaaggtgcac
tcgttgctgagctccaccatcaatggcattaagaaagtcctcaagaagcacaatgaggac
tttgagatgacgtcattctggttatccaacacctgccgcctccttcactgtttgaagcag
tacagtggggatgagggtttcatgacacagaacacggcgaagcagaatgagcactgtctc
aagaactttgacctcactgaataccgtcaggtgctaagtgacctttccattcagatctat
cagcaactcattaaaattgctgagggcctgctacagcctatgatagtttctgccatgctg
gaaaatgagagtatccaggggctgtcaggggtgaggccaactggctaccggaagcgctcg
tccagcatggtggacggagaaaattcgtattgcctggaggccatcatccgccagatgaat
ttctttcatacagtcctgtgtgaccagggcctggaccctgagattatcctgcaggtgttc
aaacagcttttctacatgatcaatgcggtgactcttaacaacctactcctgcggaaagat
gcctgctcctggagcaccggcatgcaactcaggtacaacataagtcaactcgaagagtgg
cttcggggaaaaaaccttcagcagagtggagcggttcagaccatggagcccttgatccag
gcagcccaactccttcagctgaagaagaagacccaggaggatgctgaggccatctgctct
ctgtgtacctccctcagcacccagcagattgtcaaaattttaaacctctacactcccttg
aatgaatttgaagaacgggtgacagtgtcctttatacgaacaatccaggctcagctacaa
gagaggagtgacccccagcagctactgctggactccaaacacatgtttcctgttctgttt
ccatttaatccatctgctctgaccatggactcaatccacatcccggcctgtctcaatctg
gagttcctcaatgaagtctga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (19)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (17)   
DNA sequence (19)   
   RefSeq(nuc) (17)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (58)   

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