KEGG   Rattus norvegicus (rat): 25218
Entry
25218             CDS       T01003                                 
Symbol
Vps52
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog
  KO
K20298  vacuolar protein sorting-associated protein 52
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    25218 (Vps52)
Membrane trafficking [BR:rno04131]
 Protein recycling
  Others
   EARP complex
    25218 (Vps52)
 Endosome - Golgi transport
  Tethering complex
   GARP complex
    25218 (Vps52)
SSDB
Motif
Pfam: Vps52_C Vps52_CC Sec3_CC Sec3_C-term DUF4201 Dor1 COG6_N
Other DBs
NCBI-GeneID: 25218
NCBI-ProteinID: NP_149088
RGD: 3618
Ensembl: ENSRNOG00000000470
Vega: OTTRNOG00000001938
UniProt: O55166 B2GUV2
Position
20:complement(4922599..4933458)
AA seq 723 aa
MAAAATMAAAARELVLRAGASDMEEEEGPLGAGSGLQEPLQLGELDITSDEFILDEVDVH
IQANLEDELVKEALKTGVDLRHYSKQVELELQQIEQKSIRDYIQESENIASLHNQITACD
AVLERMEQMLGAFQSDLSSISCEIRTLQEQSGAMNIRLRNRQAVRGKLGELVDGLVVPSA
LVTAILEAPVTEPRFLEQLQELDAKAAAVREQEARGTAACADVRGVLDRLRVKAVTKIRE
FILQKIYSFRKPMTNYQIPQTALLKYRFFYQFLLGNERATAKEVRDEYVETLSKIYLSYY
RSYVGRLMKVQYEEVAEKDDLMGVEDTAKKGFFSKPSLRSRNTIFTLGTRGAVISPAELE
APILVPHTAQRGEQRYPFEALFRSQHYALLDNSCREYLFICEFFVVSGPAAHDLFHAVMG
RTLSMTLKHLESYLADCYDAIAVFLCIHIVLRFRNIAAKRDVPALDRYWEQVLALLWPRF
ELILEMNVQSVRSTDPQRLGGLDTRPHYITRRYAEFSSALVSINQTIPNERTLQLLGQLQ
VEVENFVLRVAAEFSSRKEQLVFLINNYDMMLGVLMERAADDSKEVESFQQLLNARTQEF
IEELLSPPFGGLVAFVKEAEALIERGQAERLRGEEARVTQLIRGFGSSWKASVESLSQDV
MRSFTNFRNGTSIIQGALTQLIQLYHRFHRVLSQPQLRALPARAELINIHHLMVELKKHK
PNF
NT seq 2172 nt   +upstreamnt  +downstreamnt
atggcagccgcggcgaccatggcggctgctgcccgggagctggtgttgcgggccggcgct
tcagatatggaggaggaggagggcccgctgggggctggttctggactccaagagccccta
caactcggggagttggatatcacctctgatgaattcatcttggatgaagtggatgttcac
atccaggcaaatctggaagacgagttagtgaaggaagctctcaaaacgggtgtggatctt
cgacactattcaaagcaggtggagctagagctgcagcagattgagcagaagtcaatccgg
gactacatccaagagagtgaaaacatagcctctctgcacaatcagatcacagcctgtgat
gccgtcctagagcgcatggagcagatgctgggagcttttcagagcgacctcagctccatc
agctgtgagatccgcaccctgcaggagcagtcgggggccatgaacatccgacttcgtaac
cggcaggcagttcgggggaaacttggggaactcgtcgatgggctagtggtgccctctgct
ctggtcacagcaattctcgaagctccagtgacagagcccaggttcctggagcagctccag
gagctggacgccaaggcggctgcggtcagagagcaggaggcgagaggcacggccgcctgt
gcagacgtcagaggcgtgctcgaccggctccgggtcaaggcggtgacaaagatccgtgag
ttcattctccagaagatttactcgttccgaaagccgatgaccaactatcagatcccccag
acggccctgctgaagtacaggtttttctatcagtttctgctgggcaacgagcgtgctaca
gccaaggaggtcagggatgagtacgtagagacgctgagcaagatctacctgtcatactac
cgctcgtacgtggggcggctcatgaaagtgcagtacgaggaagttgctgagaaagacgat
ctaatgggtgtagaagacacagcaaagaaaggattcttctcgaagccgtccctgcgaagc
aggaacaccatctttaccctgggcacccgtggtgctgtcatctcaccggccgagctcgag
gcccccatcctggtgccccatactgcccagcgtggagagcagaggtacccgtttgaagca
ctcttccgcagccagcactatgccctccttgacaattcttgccgtgaatatctcttcatc
tgtgaatttttcgtcgtctctggcccggctgcccatgacctgttccacgccgtcatgggc
cgcacgctgtccatgacgctgaaacacctggagtcctacctggccgactgctacgacgcc
attgctgtttttctctgtatccacatcgttctccggttccgcaacatagcagcaaagagg
gacgtccctgccctggacagatactgggagcaggtgctggccctgctgtggcctcgattt
gagctcatcctggagatgaatgtgcagagcgtccgcagcactgacccccagcgcctcggg
gggctggacacccggccccactatatcacacgccgctacgccgagttctcctccgcgctt
gtcagcatcaaccagaccatccccaatgagcgcacgctgcagctgctgggacagctacag
gtggaggtggagaactttgtcctccgcgtggctgcggagttctcctccaggaaggagcag
ctcgtgtttctgatcaacaactatgacatgatgctgggtgtgctgatggagcgggctgct
gacgacagcaaagaggtggagagtttccagcagctgctcaatgctcggacacaggagttc
attgaagagttgctgtcacccccctttggaggtctggtggcatttgtgaaggaggctgaa
gccttgattgagcgtgggcaggctgagcggctccgaggggaggaagcccgagtcacccag
ctgatccgcggctttggtagttcctggaaggcgtcagtggagtccctgagtcaggatgta
atgcggagttttaccaactttcgaaatggaaccagcatcatccagggggcgctcacacag
ctgatccagctctaccatcgcttccaccgtgtgctgtcccagcctcagctccgtgccctc
cctgccagggccgaactcatcaacatccatcacctcatggtggagctgaagaaacacaag
ccgaacttctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (8)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (12)   
   RefSeq(nuc) (8)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (37)   

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