KEGG   Rattus norvegicus (rat): 25242
Entry
25242             CDS       T01003                                 
Symbol
Arnt
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator isoform 1
  KO
K09097  aryl hydrocarbon receptor nuclear translocator
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04066  HIF-1 signaling pathway
rno04148  Efferocytosis
rno04934  Cushing syndrome
rno05200  Pathways in cancer
rno05207  Chemical carcinogenesis - receptor activation
rno05208  Chemical carcinogenesis - reactive oxygen species
rno05211  Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04066 HIF-1 signaling pathway
    25242 (Arnt)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    25242 (Arnt)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    25242 (Arnt)
   05207 Chemical carcinogenesis - receptor activation
    25242 (Arnt)
   05208 Chemical carcinogenesis - reactive oxygen species
    25242 (Arnt)
  09162 Cancer: specific types
   05211 Renal cell carcinoma
    25242 (Arnt)
  09167 Endocrine and metabolic disease
   04934 Cushing syndrome
    25242 (Arnt)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    25242 (Arnt)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    25242 (Arnt)
SSDB
Motif
Pfam: PAS_3 PAS PAS_11 HLH PAS_9 Per3-like_PAS-A Spt20_SEP
Other DBs
NCBI-GeneID: 25242
NCBI-ProteinID: NP_036912
RGD: 2153
Ensembl: ENSRNOG00000031174
UniProt: P41739
Position
2:185686703..185745546
AA seq 809 aa
MAATTANPEMTSDVPSLGPTIASGNPGPGIQGGGAVVQRAIKRRSGLDFDDEGEVNSKFL
RCDDEQMCNDKERFARSDDEQSSADKERLARENHSEIERRRRNKMTAYITELSDMVPTCS
ALARKPDKLTILRMAVSHMKSLRGTGNTSTDGSYKPSFLTDQELKHLILEAADGFLFIVS
CETGRVVYVSDSVTPVLNQPQSEWFGSTLYDQVHPDDVDKLREQLSTSENALTGRILDLK
TGTVKKEGQQSSMRMCMGSRRSFICRMRCGTSSVDPVSMNRLSFLRNRCRNGLGSVKEGE
PHFVVVHCTGYIKAWPPAGVSLPDDDPEAGQGSKFCLVAIGRLQVTSSPNCTDMSNICQP
TEFISRHNIEGIFTFVDHRCVATVGYQPQELLGKNIVEFCHPEDQQLLRDSFQQVVKLKG
QVLSVMFRFRAKNREWLWMRTSSFTFQNPYSDEIEYIICTNTNVKNSSQEPRPTLSNTIQ
RSQLGPTTNLSLEMGTGQLASRQQQQQQQQQQQQQQQQQQQQQQQQQTELDMVPGRDGLA
SYSHSQVSVQPVATAGSEHSKPLEKSEGLFVQDRDPRFSEIYPNISADQSKGLSSSTVPA
TQQLFSQGSSFPPNPRPAENFRNSGLTPPVTIVQPSSSAGQILAQISRHSNLTQGSAPTW
TSSTRPGFSAQLPTQATAKTRSSQFGVNNFQTSSSFSAMSLPGAPTASPSTAAYPTLPNR
GSNFPPETGQTTGQFQTRTAEGVGVWPQWQGQQPHHRSSSNEQHVQPTSAQPSSQPEVFQ
EMLSMLGDQSNTYNNEEFPDLTMFPPFSE
NT seq 2430 nt   +upstreamnt  +downstreamnt
atggcggcgactacagctaacccagaaatgacatcagatgtgccatcactgggtcccacc
attgcttctggaaatcccggacctgggattcaaggtggaggagctgttgtccagagggct
attaagcgacggtcagggctggattttgatgatgaaggagaagtgaacagtaaatttttg
agatgtgatgatgagcagatgtgtaacgacaaagagcggtttgccaggtcggatgatgag
cagagctctgcggataaagagagacttgccagggaaaatcatagtgaaatagagcggcgg
cgacggaacaagatgacagcttacatcacagaactgtcagacatggtacctacctgtagt
gccctggctcgaaaaccagacaagctaaccatcttacgcatggctgtttctcacatgaag
tccttgaggggaacgggcaatacatccactgacggctcctacaagccgtccttcctcact
gatcaggaactgaaacatttgattttggaggcagcagatggttttctgtttattgtctct
tgtgagactggccgagtggtgtatgtctctgactcggtgactcccgttttgaaccagcca
cagtctgaatggtttgggagcacactgtatgaccaagtgcacccagatgatgtggataaa
cttcgagagcagctttctacttcagaaaatgccctaacagggcggatcctggatctgaag
actggaacagtgaaaaaggaaggtcagcagtcttccatgaggatgtgcatgggctcaaga
agatcgttcatctgccggatgaggtgtggcaccagctctgtggaccctgtttccatgaat
agactgagctttttgaggaacagatgcaggaatggacttggctctgtgaaggaaggagag
cctcactttgtggtagtccactgcacaggttacatcaaggcctggccaccagcaggtgtc
tccctcccagatgatgatccagaggctggccaggggagcaaattctgcctagtggccatt
ggcaggctgcaggtaaccagttctcctaactgtacagatatgagtaacatctgtcagcca
acagagttcatctccagacataacattgaagggatattcacttttgtagatcatcgttgt
gtggctactgttggctaccagccacaggagctcttaggaaagaatattgtagaattttgt
catcctgaagaccaacaacttctaagagacagctttcagcaggtggtgaaattaaaaggc
caagtgctgtctgtcatgttccgattccgagctaagaaccgagaatggctgtggatgaga
acaagctcctttactttccaaaacccgtattcagatgaaattgagtatattatctgcacc
aacaccaacgtgaagaactctagccaggaaccacggcctacattgtctaacacaatccag
aggtcacagctaggtccgacaactaatttatccctagagatgggtacagggcagctggca
tccaggcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcag
cagcagcagcagcagcagcagacagaattggatatggtaccaggaagagatgggctggcc
agctatagtcattcccaggtttctgtccagcccgtggcaactgcaggatcagaacacagc
aagccccttgagaagtcagaaggtctctttgtgcaggacagagatccgaggttttcagaa
atctatcccaacatcagtgcagatcagagtaaaggcctctcctccagcactgtccctgcc
acccaacagctgttctcccagggcagctcattccctcctaacccccggccggcagaaaat
ttcaggaatagtggtcttacccctcccgtaaccattgtccagccgtcatcttctgcaggg
cagatattggcccagatttctcgtcactccaaccttacccagggatcagcaccaacttgg
acctctagcactcgcccaggtttctctgcccagctgcctactcaggctacagccaagact
cgttcttcacaatttggtgtgaacaactttcagacttcgtcctccttcagtgccatgtct
cttccgggtgctcccactgcctcacccagtactgctgcctaccctactcttcctaaccgt
ggatccaactttcctcctgagactggacagacaacaggacagttccagacccggacagca
gagggtgtgggtgtctggccacagtggcaaggccagcagccccatcaccggtctagttcc
aatgagcaacatgttcagccaacatcagcacaaccaagtagccagcctgaggtctttcaa
gaaatgctgtccatgctgggagaccagagcaacacctacaacaatgaagagtttcctgat
ctaactatgtttccccctttttctgaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (7)   
   KEGG PATHWAY (7)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (17)   
   RefSeq(nuc) (3)   
   GenBank (7)   
   EMBL (7)   
Protein domain (7)   
   Pfam (7)   
All databases (45)   

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