KEGG   Rattus norvegicus (rat): 25243
Entry
25243             CDS       T01003                                 
Symbol
Arnt2
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator 2
  KO
K15589  aryl hydrocarbon receptor nuclear translocator 2
Organism
rno  Rattus norvegicus (rat)
Pathway
rno05200  Pathways in cancer
rno05202  Transcriptional misregulation in cancer
rno05211  Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:rno00001]
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    25243 (Arnt2)
   05202 Transcriptional misregulation in cancer
    25243 (Arnt2)
  09162 Cancer: specific types
   05211 Renal cell carcinoma
    25243 (Arnt2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    25243 (Arnt2)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    25243 (Arnt2)
SSDB
Motif
Pfam: PAS_3 PAS PAS_11 HLH PAS_9 PAS_4 Per3-like_PAS-A PAS_2
Other DBs
NCBI-GeneID: 25243
NCBI-ProteinID: NP_036913
RGD: 2154
Ensembl: ENSRNOG00000013017 ENSRNOG00000063992
UniProt: Q78E60 A6JCN8
Position
1:complement(147645354..147801986)
AA seq 712 aa
MATPAAVNPPEMASDIPGSVTLPVAPMAATGQVRMAGAMPARGGKRRSGMDFDDEDGEGP
SKFSRENHSEIERRRRNKMTQYITELSDMVPTCSALARKPDKLTILRMAVSHMKSMRGTG
NKSTDGAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWFG
STLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRSFICR
MRCGNAPLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVVHCTGYIKAWPPAGMSIPEED
ADVGQGSKYCLVAIGRLQVTSSPVCMDMSGMSVPTEFLSRHNSDGIITFVDPRCISVIGY
QPQDLLGKDILEFCHPEDQSHLRESFQQVVKLKGQVLSVMYRFRTKNREWLLIRTSSFTF
QNPYSDEIEYVICTNTNVKQLQQQQAELEVHQRDGLSSYDLSQVPVPNLPTGVHEAGKPV
EKADAIFSQERDPRFAEMFAGISASEKKMMSSASASGSQQIYSQGSPFPAGHSGKAFSSS
VVHVPGVNDIQSSSSTGQNISQISRQLNQGQVAWTGSRPPFPGQPSKTQSSAFGIGSSHP
YPADPSSYSPLSSPAASSPSGNAYPSLANRTPGFAESGQSGGQFQGRPSEVWSQWQSQHH
GQQSGEQHSHQQPGQTEVFQDMLPMPGDPTQGTGNYNIEDFADLGMFPPFSE
NT seq 2139 nt   +upstreamnt  +downstreamnt
atggcaaccccggccgccgtcaaccctccggaaatggcttcagacatacctggatctgtg
accttgcctgttgcccccatggcggccacgggacaggtgagaatggcaggggccatgcct
gcccgaggaggaaagcggcgatccggaatggactttgatgacgaagatggtgaaggtccc
agtaaattttcaagagagaaccacagtgagattgagcggcgcaggcggaacaagatgact
caatatattacggaactctccgacatggttcccacctgcagtgcactagctaggaagcca
gacaagctcaccattctacgcatggcggtctcacacatgaagtccatgaggggcaccggc
aacaaatctactgacggcgcatataagccttccttcctcactgagcaggaactgaagcat
ctcatccttgaagctgctgacggatttctgtttgtggtggctgccgagacagggagagta
atctacgtgtctgattctgtcactcctgtcctgaaccagccacagtcagagtggtttggg
agcacactctatgaacaggtgcaccctgatgacgtggagaaactgagagaacagctgtgt
acttcagaaaactccatgacaggccgcatcctagacctgaagactgggacagtgaagaag
gagggacagcagtcgtccatgcgcatgtgtatgggctcccggcgctccttcatctgtaga
atgaggtgtggaaatgctcccttggaccacctgcctttgaacagaataaccaccatgagg
aaaaggttcaggaatggccttggccctgtgaaagaaggagaagcccaatatgccgtggtc
cactgcacaggttacatcaaggcttggccaccagcaggaatgagcatacccgaagaagat
gctgatgttggacaaggcagtaaatattgccttgtggcaatcgggaggctccaggtgacc
agctctcctgtgtgcatggacatgagtggcatgtcagtgcccacggagttcctgtctcgg
cataactctgatgggatcatcacgtttgtagacccaagatgcatcagtgtgattggctac
cagccccaggaccttctgggaaaagatattttggaattctgccaccctgaggatcagagc
cacctacgggagagcttccagcaggtggttaaactgaagggccaagtgctgtcggtcatg
tacaggttccgcaccaagaaccgggagtggctgttgatccgcaccagcagcttcaccttc
cagaacccctactctgatgagatcgagtatgtcatctgcaccaacaccaacgtcaagcaa
cttcagcagcagcaggcagagctggaggtacaccagcgagacgggctgtcatcatatgac
ttgtctcaggtcccggtacccaacctacccactggtgttcatgaggcagggaagcctgtg
gaaaaggcagatgcgatcttctcccaagagagagaccctcgttttgctgagatgtttgca
ggcatcagtgcatcggagaagaagatgatgagctcagcctcagcatccggcagccagcag
atctactcccaaggaagtccattccctgccgggcactcgggcaaggccttcagctcttct
gtggtccatgtgcctggagtgaatgacattcagtcctcctcctcaacgggccagaacata
tcccagatctcccggcagctgaaccagggccaggtggcatggacaggcagccgtccaccc
ttcccagggcagcccagcaagacgcagtcatctgccttcggaattggatcaagccacccc
tacccagccgacccttcatcctacagtcctctctccagcccagctgcctcctcaccaagc
ggaaacgcataccccagtcttgccaacaggactccagggtttgctgagagtggacagagt
ggagggcaattccagggccggccctcagaggtctggtcccagtggcagagccagcatcac
ggacagcagagcggtgagcagcactcccaccagcagcctggccagactgaagtgttccag
gacatgctacccatgccgggcgacccgacgcaggggactggcaactataacatcgaggac
tttgctgacctgggcatgttccctccattttctgagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (2)   
   OC (1)   
   RGD (1)   
Protein sequence (14)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (11)   
DNA sequence (19)   
   RefSeq(nuc) (11)   
   GenBank (4)   
   EMBL (4)   
Protein domain (8)   
   Pfam (8)   
All databases (54)   

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