KEGG   Rattus norvegicus (rat): 252853
Entry
252853            CDS       T01003                                 
Symbol
Stx17
Name
(RefSeq) syntaxin-17
  KO
K08491  syntaxin 17
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04130  SNARE interactions in vesicular transport
rno04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    252853 (Stx17)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    252853 (Stx17)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    252853 (Stx17)
Membrane trafficking [BR:rno04131]
 SNARE
  Syntaxin (Qa)
   Stx-sER
    252853 (Stx17)
SSDB
Motif
Pfam: SNARE ThrE IncD C19orf12 DUF6861
Other DBs
NCBI-GeneID: 252853
NCBI-ProteinID: NP_663775
RGD: 708499
Ensembl: ENSRNOG00000005801
UniProt: Q9Z158 A6KJF9
Position
5:67241673..67302228
AA seq 301 aa
MSEDEEKVKLRRLEPAIQKFTKIVIPTDLERLKKHQINIEKYQRCRIWDKLHEEHINAGR
TVQQLRSNIREMEKLCLKVHKDDLILLKRMIDPMKEAAAAATAEFLQLHLESVEELKKQV
KNEEALLQPSLTRSTTIDGVHTGEAEAASQSLTQIYALPEIPRDQNAAESWETLEADLIE
LSHLVTDMSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNLQKAAKYKLAALPVAGAVIGG
VVGGPIGLLAGFKVAGIAAALGGGVLGFTGGKLIQRRKQKMMEKLTSSCPDLPSQSDKKC
S
NT seq 906 nt   +upstreamnt  +downstreamnt
atgtccgaagatgaggaaaaggtgaagctacgcaggcttgaaccagccatccagaaattc
accaagatcgtgatcccaacagacctggagaggctaaagaagcaccagataaacatcgag
aagtatcaacggtgcagaatctgggacaagttgcatgaagagcacatcaatgccgggcgc
actgttcagcaactgcgctccaatatccgagaaatggagaagctttgcttaaaagtgcac
aaagatgatctgatccttttgaagcgaatgatagatcctatgaaggaagcagcagcagcc
gccacagccgagtttctccagctccacttggaatctgtggaagaactcaagaaacaagtc
aagaatgaagaagctttactacagccttctctgaccagatccacaaccattgatggagtc
cacactggagaggctgaagctgcttcccagagtctgactcagatatatgccttgcctgaa
attcctcgagaccaaaatgctgctgagtcctgggaaaccttagaagcggacttaattgag
cttagccatctggtcaccgatatgtccctcctagtaaattctcagcaggagaagattgac
agcattgcagaccatgtcaacagtgctgctgtgaatgttgaagagggaaccaaaaacttg
cagaaggctgcaaaatacaagctggcagccctgcctgtggcaggtgcagtcatcggagga
gtggtggggggtcccatcggcctcctcgcaggcttcaaagtggcaggaattgcagctgca
cttggtggtggggtgttaggcttcacaggtggaaaattgatacaaagaaggaaacagaaa
atgatggagaagctcacttccagctgtccagatctccctagccaaagtgacaaaaaatgc
agttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (11)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (8)   
DNA sequence (14)   
   RefSeq(nuc) (10)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (41)   

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