KEGG   Rattus norvegicus (rat): 252895
Entry
252895            CDS       T01003                                 
Symbol
Pcdhga9
Name
(RefSeq) protocadherin gamma-A9 precursor
  KO
K16495  protocadherin gamma subfamily A
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:rno04515]
    252895 (Pcdhga9)
Cell adhesion molecules [BR:rno04515]
 Cadherins
  Protocadherins
   252895 (Pcdhga9)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Cadherin_tail RET_CLD1 Cadherin_3
Other DBs
NCBI-GeneID: 252895
NCBI-ProteinID: NP_001032235
RGD: 620729
UniProt: I6LBX6
Position
18:29815845..29919095
AA seq 931 aa
MAAPARRPHCTRLVLLCALLGMLWEARARQIHYSVPEETEKGYTVGNISKDLGLEPRELA
ERGVRIISKGKTQFFSLSPRSGCLVTAGRIDREELCARIAPCVLSFKVLVEDRVKLYGVE
VEVIDINDNAPKFEAENLVVKISEIAAPGARYPLPEAVDPDVGINSLQSYQLSPNRHFSL
DIQRGDDGTINPELVLERTLDREEEPSHHLVLTASDGGDPRRSSTALIQVTVLDTNDNAP
AFDQPVNRVKVLENVAPGTLLLTVRASDPDEGANGKVTYKFRKMNEKQSLLFHLHENTGE
MTVAKTLDYEECSLYEMEIQAEDGGGLKGRTKVVVTVEDVNDNRPEVTITSLFSPVREDA
PPGTVIVLFNAHDQDSGKNGQVVCSIQENPSFKLENSVDDYYRLMTAQILDREKASEYNI
TVTATDRGTPSMSTEVQITLYVADINDNPPAFSQTSYSVYLPENNPRGTSIFSVSAHDPD
ENENAKVTYSLVENTIQGAPLTSYISINSDTGVLYALQSFDYEQFRNLQMQVKASDSGHP
PLSSNVSLSVFLLDQNDNAPKILYPSLPTDGSTGVELAPRSAEAGYLVTKVVAVDEDSGQ
NAWLSYRLLKASEPGLFTVGLRSGEVRTARALLERDALKQSLVVAVQDHGQPPLSATVTL
TVAVADSIPDILADLSSISTPADPDSDITLYLVVAVAVVSCVFLLFVLVLLALRLRRWHA
SSLLQDAIGGSTGVPTSHIVGVHGVQTFLQTYSQEFSLTPDSGKSHLIFPQPNYADTLIS
QESCGKSEPLCSSVESKFPIDDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDETGTWPNN
QFDTEMLQAMILASASEAADGSSTLGGGTGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN
ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
NT seq 2796 nt   +upstreamnt  +downstreamnt
atggctgccccagccagacgcccgcactgcacaagactggtcctcttgtgtgcgctgctg
gggatgctgtgggaggccagggccaggcagatccactattccgtgccagaagagacagaa
aagggctatacagtgggaaacatctctaaggacctgggactggaaccccgtgagctggcg
gagcgtggagtccgcatcatctccaaaggtaagacccagtttttctctctgagcccgcgg
agcggttgcttggtcaccgcaggccggatagaccgggaggagctgtgtgctcggatcgct
ccctgcgtcctaagctttaaagtcctagttgaagacagagtgaaactttatggggtagaa
gtagaagtgattgatatcaatgacaatgcgccaaaatttgaagccgaaaatttagtcgta
aaaatcagcgaaatcgctgcccctggagcacggtatccactcccagaagcggttgaccca
gatgtgggcataaactccctccagagttaccagctcagccccaaccggcacttctctctg
gacattcaaaggggagacgacggaacaataaacccagagttggtgctggagcgcaccctg
gaccgagaggaagagccctctcaccacctggtcctcaccgcctccgatggcggcgacccg
cgccgctccagcacagcgctcatccaggtcacagtgttggataccaacgacaatgcccct
gctttcgaccaaccggttaaccgcgtgaaagtcctcgagaacgtggccccgggcaccctg
ctgctcacggtgagagctagcgacccggacgagggtgccaatgggaaggtgacatacaaa
ttccggaaaatgaatgaaaaacagtcgctgttattccatcttcatgaaaacacgggggaa
atgacagtagcgaaaactctggactatgaagaatgctcattgtatgaaatggaaatacag
gctgaagatggcgggggactgaaagggcggaccaaagtggtagttacggtagaagatgta
aatgacaaccggccggaagtgaccattacatctctgtttagcccagtaagggaagatgcg
cccccagggacagtaatcgtccttttcaacgctcatgaccaagattctgggaagaatggg
caagttgtctgttccatccaggagaacccatcttttaaattagaaaactcagtagacgat
tactataggttgatgacagcccagattcttgaccgagaaaaggcttctgagtataacatc
acagtgacagcaacagacaggggaaccccatccatgtccacagaggttcagatcaccctg
tatgtggcggacatcaacgacaatccgcctgccttctctcaaacctcctactcagtctat
ctccctgaaaacaaccccagaggcacctccatcttctcagttagcgcccatgatcctgat
gaaaatgagaatgcgaaggttacttactctttggtggaaaacaccatccagggggcacca
ctcacctcctacatctccattaactctgacaccggtgtgctctatgctctgcaatccttt
gactatgagcagtttcgaaatctgcagatgcaggtgaaggcaagcgacagcgggcatccg
ccactcagcagtaatgtgtccctgtctgtgtttctattggatcagaatgacaatgctccc
aagatcctctatccctccctcccgactgatggctccactggtgtagagctggctccccgc
tctgccgaggctgggtatctggtgaccaaggtggtagcagtggacgaagactctggacag
aacgcttggttatcttaccgcctgctcaaggctagtgagccgggacttttcacagtgggg
ctccgttcaggtgaagtccgcacagctcgcgccctgctagagagagatgcactcaagcaa
agcctcgtggtagctgtgcaggatcatggccagccccctctttctgctacggtcactctc
acagtggctgtggcagacagcatccccgacatcctggctgacttgagcagtatcagcact
cctgcagaccctgattccgatattactctctacctggtggtagcagttgctgtggtctcc
tgtgtcttcctactctttgtactggtgctgctggcacttaggctacggcgctggcatgcg
tcgagcctgctgcaggatgcaataggtggatccactggggtaccaacatcacatattgtg
ggtgtgcatggggttcagactttcctacaaacctattctcaagagttttccctcacacct
gactctgggaagagccacttgatcttcccccagcccaactatgccgacacgctcatcagc
caggagagctgtgggaaaagcgagcctctgtgcagctcggttgagtccaagtttcctatt
gatgacactcccttggttcctcaagccccgcccaacactgactggcgtttctctcaagcc
cagagacccggcacgagcggatcccaaaatggggatgaaaccggcacctggcccaacaac
cagttcgatacagagatgctgcaagccatgatcttggcctctgccagtgaagccgctgat
gggagctccactctgggagggggcactggcactatgggtttgagcgctcgatatggaccc
cagtttaccctgcagcacgtgcctgactaccgccagaacgtgtacatccctggcagcaat
gccacactgaccaacgcagctggcaaacgagatggcaaggctccggcaggcggcaatggc
aacaagaagaagtcgggcaagaaagagaagaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (21)   

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