KEGG   Rattus norvegicus (rat): 252902
Entry
252902            CDS       T01003                                 
Symbol
Dync1li1
Name
(RefSeq) cytoplasmic dynein 1 light intermediate chain 1
  KO
K10416  dynein cytoplasmic 1 light intermediate chain
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04145  Phagosome
rno04814  Motor proteins
rno04962  Vasopressin-regulated water reabsorption
rno05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    252902 (Dync1li1)
  09142 Cell motility
   04814 Motor proteins
    252902 (Dync1li1)
 09150 Organismal Systems
  09155 Excretory system
   04962 Vasopressin-regulated water reabsorption
    252902 (Dync1li1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    252902 (Dync1li1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    252902 (Dync1li1)
   03036 Chromosome and associated proteins [BR:rno03036]
    252902 (Dync1li1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    252902 (Dync1li1)
Membrane trafficking [BR:rno04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab4 associated proteins
    252902 (Dync1li1)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   SAC (spindle assembly checkpoint) factors
    Motor proteins
     Dynein complex
      252902 (Dync1li1)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Dyneins
     252902 (Dync1li1)
SSDB
Motif
Pfam: DLIC ABC_tran Roc AAA_16 RsgA_GTPase PduV-EutP DUF815 TsaE
Other DBs
NCBI-GeneID: 252902
NCBI-ProteinID: NP_665715
RGD: 71072
Ensembl: ENSRNOG00000010434
UniProt: Q9QXU8
Position
8:123254823..123288496
AA seq 523 aa
MAAVGRVGSFGSSPPGLASTYASGPLANELASGSGGPAAGDDEDGQNLWSCILSEVSTRS
RSKLPTGKNVLLLGEDGAGKTSLIRRIQGIEEYKKGRGLEYLYLNVHDEDRDDQTRCNVW
ILDGDLYHKGLLKFSLDALSLRDTLVMLVVDMSKPWTALDSLQKWASVVREHVDKLKIPP
EEMKEMEQKLIRDFQEYVEPGEDFPASPQRRATAAQEDRDDSVVLPLGADTLTHNLGLPV
LVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRKFCLQYGAALIYTSVKENKNIDLVYKYI
VQKLYGFPYKIPAVVVEKDAVFIPAGWDNDKKIGILHENFQTLKIEDNFEDIITKPPVRK
FVHEKEIMAEDDQVFLMKLQSLLAKQPPTAAGRPVDASPRVPGGSPRTPNRSVSSNVASV
SPIPAGSKKIDPNMKAGATSEGVLANFFNSLLSKKTGSPGGPGVGGSPGGGAAGASTSLP
PSAKKSGQKPVLSDVHAELDRITRKPASVSPTTPPSPTEGEAS
NT seq 1572 nt   +upstreamnt  +downstreamnt
atggcggccgtggggcgagtcggctcgttcggttcatctccacccgggctagcctcgact
tacgccagcggacccctagccaacgagctggcttcgggcagcggcggccccgcggcgggc
gacgatgaggacgggcagaacctttggtcctgcatcctcagcgaagtctccacgcgctcg
cgctccaagctcccgaccgggaagaacgtgctgctgctgggtgaggatggagctgggaaa
acaagcctcataagaagaatccaggggatagaggagtacaagaagggacgaggactggag
tatttgtacttaaatgtgcatgacgaagacagggatgatcaaacaagatgtaatgtatgg
atcttagatggagatctataccacaaagggctactcaagttctctctggatgccctttct
ctgagggacactctggtcatgttggtcgtcgatatgtcaaagccttggactgctttggat
tccttacagaagtgggcaagtgtggtgagagaacatgttgacaaactgaaaatcccccct
gaagaaatgaaggaaatggagcagaagttgattagagacttccaagagtacgtggagcca
ggagaagacttcccagcctcccctcagcgaagagccacggctgcacaggaggacagagat
gacagtgtcgtcctacccctgggtgcagacacgctcacacacaacctgggcctacccgtg
ctcgtagtctgtacaaagtgtgatgccattagtgtcttggagaaagaacatgactataga
gatgaacacttcgattttatccagtcacacatccgcaagttctgtttacagtacggtgca
gcgctgatttacacgtctgtcaaagagaacaagaacatagatttagtttataaatacatc
gtccagaagctgtacgggttcccctacaagatccctgcggtggtggtggaaaaggacgca
gtgttcattccagcagggtgggataatgataagaaaataggaatattacatgaaaatttt
caaactttgaaaatagaagataattttgaagacatcataaccaaacctcctgtccgaaag
tttgtgcatgagaaggagattatggcagaagatgaccaagtgtttcttatgaagctacag
tctcttttagcaaagcaacctccaactgctgctggaaggcctgtggatgcatcaccaaga
gtccctggaggctctcctcgaacaccaaacagatccgtgtcatccaatgttgccagcgtg
tcccccatccctgcaggatccaaaaaaattgatcccaacatgaaagctggagcaaccagc
gaaggggtcctggcaaatttcttcaacagtctgttgagtaagaagactggctctcctgga
ggccccggggtcgggggcagtcctggaggaggggctgcaggtgcaagcacgagtttgcca
ccatccgccaagaagtcaggccagaaacctgtgctctcagatgttcatgccgagctcgac
agaatcacacggaaacctgcttctgtttctcctacaacacctccatctcctacggaagga
gaagcctcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (35)   

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