KEGG   Rattus norvegicus (rat): 25311
Entry
25311             CDS       T01003                                 
Symbol
Dcc
Name
(RefSeq) netrin receptor DCC precursor
  KO
K06765  deleted in colorectal carcinoma
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04360  Axon guidance
rno05200  Pathways in cancer
rno05210  Colorectal cancer
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    25311 (Dcc)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    25311 (Dcc)
  09162 Cancer: specific types
   05210 Colorectal cancer
    25311 (Dcc)
SSDB
Motif
Pfam: Neogenin_C fn3 I-set Ig_3 Ig_2 ig Pur_ac_phosph_N V-set C2-set_2 Interfer-bind Ig_4 Sp38 V-set_CD47 FAM176 EphA2_TM CD34_antigen DUF4998 Ly49 Shisa Cadherin_C_2
Other DBs
NCBI-GeneID: 25311
NCBI-ProteinID: NP_036973
RGD: 2492
Ensembl: ENSRNOG00000033099
UniProt: Q63155
Structure
Position
18:complement(67144272..68248159)
AA seq 1445 aa
MENSLGCVWVPKLAFVLFGASLLSAHLQVTGFQIKPFTSLHFVSEPSDAVTMRGGNVLLN
CSAESDRGVPVIKWKKDGLILALGMDDRKQQLPNGSLLIQNILHSRHHKPDEGLYQCEAS
LGDSGSIISRTAKVMVAGPLRFLSQTESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDL
NPIPGDSRVVVLPSGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQL
YFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSLLGGSNLLISNV
TDDDSGTYTCVVTYKNENISASAELTVLVPPWFLNHPSNLYAYESMDIEFECAVSGKPVP
TVNWMKNGDVVIPSDYFQIVGGSNLRILGVVKSDEGFYQCVAENEAGNAQSSAQLIVPKP
AIPSSSILPSAPRDVVPVLVSSRFVRLSWRPPAEAKGNIQTFTVFFSREGDNRERALNTT
QPGSLQLTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPELQVPGPVENLHAVSAS
PTSILITWEPPAYANGPVQGYRLFCTEVSTGKEQNIEVDGLSYKLEGLKKFTEYTLRFLA
YNRYGPGVSTDDITVVTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNGFITGYKI
RHRKTTRRGEMETLEPNNLWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETPENDL
DESQVPDQPSSLHVRPQTNCIIMSWTPPLNPNIVVRGYIIGYGVGSPYAETVRVDSKQRY
YSIERLESSSHYVISLKAFNNAGEGVPLYESATTRSITDPTDPVDYYPLLDDFPTSGPDV
STPMLPPVGVQAVALTHEAVRVSWADNSVPKNQKTSDVRLYTVRWRTSFSASAKYKSEDT
TSLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEAAPTSAPKDLTVITREGKP
RAVIVSWQPPLEANGKITAYILFYTLDKNIPIDDWIMETISGDRLTHQIMDLSLDTMYYF
RIQARNAKGVGPLSDPILFRTLKVEHPDKMANDQGRHGDGGYWPVDTNLIDRSTLNEPPI
GQMHPPHGSVTPQKNSNLLVITVVTVGVLTVLVVVIVAVICTRRSSAQQRKKRATHSASK
RKGSQKDLRPPDLWIHHEEMEMKNIEKPAGTDPAGRGSPIQSCQDLTPVSHSQSESQMGS
KSASHSGQDTEEAGSSMSTLERSLAARRATRTKLMIPMEAQSNNPAVVSAIPVPTLESAQ
YPGILPSPTCGYPHPQFTLRPVPFPTLSVDRGFGAGRTVSEGPTAQQQPMLPPAQPEHPS
SEEAPSRTIPTACVRPTHPLRSFANPLLPPPMSAIEPKVPYTPLLSQPGPTLPKTHVKTA
SLGLAGKARSPLLPVSVPTAPEVSEESHKPTEDPASVYEQDDLSEQMASLEGLMKQLNAI
TGSAF
NT seq 4338 nt   +upstreamnt  +downstreamnt
atggagaatagtcttggatgtgtctgggtacccaagctggcttttgtactcttcggagct
tccttgctcagcgcgcatcttcaagtcacgggtttccaaattaaacctttcacgtcactt
cattttgtgtctgaaccttctgatgctgtcacaatgcggggaggaaacgtcctgctcaac
tgctctgcagagtctgaccgcggagtcccagtcatcaagtggaagaaagatggccttatc
ctggccttgggaatggatgacagaaagcagcaacttcctaatgggtctctgttgatacaa
aacatacttcattccagacaccataaaccggatgaaggactttaccaatgcgaggcatcc
ttaggagactctggctcaattattagtcggacagcaaaagttatggtagcaggaccactg
aggttcctctcccagacagaatctatcacagccttcatgggagatacagtgttacttaag
tgtgaagtcattggggaccccatgccaacaatacactggcagaagaatcaacaagacctc
aacccgatcccaggagactcgcgtgtggtcgtcttgccctccggagcattgcagatcagc
cgacttcaaccaggagacagtggagtctaccgatgctcagctcggaatccagccagcaca
agaacaggaaatgaagccgaagtcaggattttatcagacccaggcctgcataggcagctg
tattttctgcagagaccatccaatgtgatagccattgaagggaaagatgctgtcctggag
tgttgtgtttctggctatcctccaccaagtttcacctggttacggggcgaggaggtcatc
caactcaggtctaaaaagtattcgttgttgggtgggagcaatttgctcatctctaatgtg
acagatgatgacagtgggacctatacgtgcgttgtcacatataagaatgagaatattagt
gcctctgcagagctcacggtcttggttccgccatggtttttaaatcacccttccaacctc
tatgcctatgaaagcatggacattgagtttgaatgtgcagtgtccgggaagcctgtgccc
actgtgaattggatgaagaatggagatgtggtgattcctagtgattactttcagatagtg
ggaggaagcaacttacgaatccttggggtggtgaaatcagatgaaggcttttatcaatgt
gtggctgaaaatgaggctggcaatgcccaaagtagtgcccagctgattgtccccaagcct
gccatcccaagctccagcatcctcccttctgctcccagagatgtggtccctgtcttggtt
tctagtcgctttgtccgtttgagctggcgtccacctgccgaagccaaaggaaacattcaa
acattcacagtctttttctccagagagggtgacaacagggagcgagctttgaatacaacc
cagcctgggtcccttcagcttactgtgggaaacttgaaaccagaagccatgtataccttc
agagttgttgcctacaatgagtggggaccaggggagagctctcaacccatcaaggtggcc
actcagcctgagttgcaagttccagggccagtagaaaacctgcacgctgtatctgcctct
cctacctcaattcttattacatgggaaccccctgcctatgcaaatggtccggttcaaggt
tacagattgttttgcactgaggtgtctacaggaaaagaacagaatatagaggttgatgga
ctatcttataaactggaaggcctgaaaaaattcacggaatatactcttcgattccttgct
tataatcgttatggtccgggagtgtctaccgatgacataacagtcgttacactttcagat
gtgccaagtgctccacctcagaacgtctctctggaagtggttaattcaaggagtatcaaa
gtaagctggctccctcctccatcgggaacacaaaatggatttattactggctataaaatt
cgacacagaaagactacccgcaggggtgagatggaaacactggaacccaataacctctgg
tacctcttcacaggattggagaaggggagtcagtacagtttccaagtgtcagccatgact
gtcaatggcactggaccaccttctaactggtacacagcagaaaccccagagaacgactta
gacgagtctcaagttcctgaccagccaagttctctccatgtgaggccccagacaaactgc
atcatcatgagttggactccacctctcaacccaaacatcgtggtgagaggctatattatc
ggatatggtgttggcagcccttatgccgagacagtgcgtgtagacagtaagcagcggtac
tattccatcgagaggctggagtcgagttctcattatgtaatctccttaaaagctttcaac
aatgctggagaaggtgtccctctctacgaaagtgccactacccgttccataacagacccc
actgaccccgttgattattatcctttgcttgatgatttccccacctcgggcccagatgtc
tccacccccatgctcccaccagtaggtgtgcaggctgtggctcttacccacgaggctgtg
agggtcagctgggcagacaactctgtcccgaagaaccagaagacatccgacgttcggctt
tacacggttcggtggaggaccagcttttccgccagtgccaagtacaagtcagaagacaca
acgtctctcagctacacagcgactggcctcaagccaaataccatgtatgagttctcagtc
atggtgacaaagaacagaaggtcaagcacgtggagcatgactgcacacgccaccacctac
gaagctgccccaacttctgctcccaaggatttgacagtcattactcgtgaggggaagcct
cgtgctgtcattgtgagctggcagcctcccttggaagccaatgggaaaatcaccgcttac
atcttgttttataccttggacaagaatatacccatcgatgactggattatggagactatc
agcggtgaccggcttacccatcagatcatggatctgagcctggacactatgtattacttt
cgaattcaagcacggaacgctaaaggcgtggggcccctctcggatcccatcctcttcagg
actttgaaagtggaacaccctgacaaaatggctaatgaccaaggtcgtcatggagatgga
ggttattggccagttgatactaacttgattgatagaagcactctcaacgaaccacccatt
ggacaaatgcaccccccacatggcagtgtaactcctcaaaagaacagcaacctgcttgtc
ataaccgtggtcaccgtgggcgttctcaccgtgttggttgtggtcattgtagcagtgatt
tgtacccggcgctcttcagcccagcaaaggaagaaacgggccacgcacagtgcgagcaag
aggaagggcagtcagaaggacctccggcctccggatctttggatacatcatgaagaaatg
gaaatgaaaaatatcgagaagccggccggaaccgaccctgcaggaagaggctcccccatc
cagagttgccaagacctcacaccagtcagccacagccagtcagaaagccagatgggaagc
aaaagtgcctcccattcaggtcaagataccgaggaggcagggagctccatgtctactcta
gaaaggtcccttgcagcacgccgggccaccaggaccaagctcatgattcccatggaggcc
cagtccaataatcctgctgtcgtgagtgccatccctgtaccaaccctagaaagtgcccag
tatccaggaatcctcccgtctcccacatgtggatatccgcatccacagttcactctccgg
ccagtaccattcccaacactgtctgtggaccgaggtttcggagcaggaagaactgtgagt
gaaggaccaacagcacaacaacaacccatgctgcccccagctcagcctgaacatcccagc
agcgaagaagcccccagcagaaccatccctacagcctgtgtgcggccaactcacccactc
cgaagttttgcaaaccctttgctacctccacctatgagtgcaatagaaccaaaagtccct
tacacaccgcttttgtcgcagccaggacccacccttcccaagactcatgttaaaacggcc
tcccttgggctagcaggaaaggcaaggtcccctttgcttcccgtgtctgtgccaacagcc
cctgaagtgtctgaagagagtcacaagccaacagaggatccagccagtgtatatgaacag
gatgacttgagtgaacaaatggcgagtttggaagggctaatgaagcaactcaatgccatc
acaggctccgccttttga

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (11)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (9)   
DNA sequence (11)   
   RefSeq(nuc) (9)   
   GenBank (1)   
   EMBL (1)   
3D Structure (4)   
   PDB (4)   
Protein domain (20)   
   Pfam (20)   
All databases (57)   

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