KEGG   Rattus norvegicus (rat): 25328
Entry
25328             CDS       T01003                                 
Symbol
Lamp1
Name
(RefSeq) lysosome-associated membrane glycoprotein 1 precursor
  KO
K06528  lysosomal-associated membrane protein 1/2
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04140  Autophagy - animal
rno04142  Lysosome
rno04145  Phagosome
rno05152  Tuberculosis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    25328 (Lamp1)
   04142 Lysosome
    25328 (Lamp1)
   04140 Autophagy - animal
    25328 (Lamp1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05152 Tuberculosis
    25328 (Lamp1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    25328 (Lamp1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    25328 (Lamp1)
   04090 CD molecules [BR:rno04090]
    25328 (Lamp1)
Membrane trafficking [BR:rno04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Cargo receptors
    25328 (Lamp1)
  Other autophagy associated proteins
   RNautophagy/DNautophagy
    25328 (Lamp1)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of hepatic cells
   25328 (Lamp1)
CD molecules [BR:rno04090]
 Proteins
  25328 (Lamp1)
SSDB
Motif
Pfam: Lamp Lamp2_2nd CTV_P6
Other DBs
NCBI-GeneID: 25328
NCBI-ProteinID: NP_036989
RGD: 2989
Ensembl: ENSRNOG00000019629
Vega: OTTRNOG00000002006
UniProt: P14562 A6IWJ4
Position
16:complement(83058131..83082843)
AA seq 407 aa
MAAPGARRPLLLLLLAGLAHSAPALFEVKDNNGTACIMASFSASFLTTYDAGHVSKVSNM
TLPASAEVLKNSSSCGEKNASEPTLAITFGEGYLLKLTFTKNTTRYSVQHMYFTYNLSDT
QFFPNASSKGPDTVDSTTDIKADINKTYRCVSDIRVYMKNVTIVLWDATIQAYLPSSNFS
KEETRCPQDQPSPTTGPPSPSPPLVPTNPSVSKYNVTGDNGTCLLASMALQLNITYMKKD
NTTVTRAFNINPSDKYSGTCGAQLVTLKVGNKSRVLELQFGMNATSSLFFLQGVQLNMTL
PDAIEPTFSTSNYSLKALQASVGNSYKCNSEEHIFVSKALALNVFSVQVQAFRVESDRFG
SVEECVQDGNNMLIPIAVGGALAGLVLIVLIAYLIGRKRSHAGYQTI
NT seq 1224 nt   +upstreamnt  +downstreamnt
atggcggccccgggcgcccggcggccgctgctcctgttgctgctggcaggccttgcacac
agcgccccagcactgttcgaggtgaaagacaacaacggcacagcgtgtataatggccagc
ttctctgcctcctttctgaccacctatgatgctggacatgtttctaaggtctcgaatatg
accctgccagcctctgcagaagtcctgaagaatagcagctcttgtggtgaaaagaatgct
tctgagcccaccctcgcaatcacctttggagaaggatatttactgaaactcaccttcaca
aaaaacacaacacgttacagtgtccagcacatgtatttcacatataacctgtcagacaca
caattctttcccaatgccagctccaaagggcccgacactgtggattccacaactgacatc
aaggcagacatcaacaaaacataccgatgtgtcagcgacatcagggtctacatgaagaat
gtgaccattgtgctctgggacgctactatccaggcctacctgccgagtagcaacttcagc
aaggaagagacacgctgcccacaggatcaaccttccccaactactgggccacccagcccc
tcaccaccacttgtgcccacaaaccccagtgtgtccaagtacaatgtgactggtgacaat
ggaacctgcctgctggcctctatggcactgcaactcaacatcacctacatgaagaaggac
aacacgactgtgaccagagcattcaacatcaacccaagtgacaaatatagtgggacttgc
ggtgcccagttggtgaccctgaaggtggggaacaagagcagagtcctggagctgcagttt
gggatgaatgccacttctagcctgtttttcctgcaaggagttcagttgaacatgactctt
cctgatgccatagagcccacgttcagcacctccaactattccctgaaagctcttcaggcc
agtgtcggcaactcatacaagtgcaacagtgaggagcacatctttgtcagcaaggcgctc
gccctcaatgtcttcagcgtgcaagtccaggctttcagggtagaaagtgacaggtttggg
tctgtggaagagtgtgtacaggacggtaacaacatgctgatccccattgctgtgggcggg
gccctggcagggctggtcctcatcgtcctcatcgcctacctcatcggcaggaagaggagt
cacgcgggctatcagaccatctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (14)   
   RefSeq(nuc) (2)   
   GenBank (6)   
   EMBL (6)   
Protein domain (3)   
   Pfam (3)   
All databases (38)   

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