KEGG   Rattus norvegicus (rat): 25350
Entry
25350             CDS       T01003                                 
Symbol
Sftpd
Name
(RefSeq) pulmonary surfactant-associated protein D precursor
  KO
K10068  pulmonary surfactant-associated protein D
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04145  Phagosome
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    25350 (Sftpd)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    25350 (Sftpd)
  09183 Protein families: signaling and cellular processes
   04091 Lectins [BR:rno04091]
    25350 (Sftpd)
Membrane trafficking [BR:rno04131]
 Endocytosis
  Phagocytosis
   Opsonins
    25350 (Sftpd)
Lectins [BR:rno04091]
 C-Type lectins
  Group 3: Collectins
   25350 (Sftpd)
SSDB
Motif
Pfam: Collagen Surfac_D-trimer Lectin_C
Other DBs
NCBI-GeneID: 25350
NCBI-ProteinID: NP_037010
RGD: 3667
Ensembl: ENSRNOG00000056001
UniProt: P35248 A6K9M0
Position
16:complement(17080575..17093047)
AA seq 374 aa
MLHFLSMLVLLVQPLGDLGAEMKTLSQRSITNTCTLVLCSPTENGLPGRDGRDGREGPRG
EKGDPGLPGPMGLSGLPGPRGPVGPKGENGSAGEPGPKGERGLVGPPGSPGISGPAGKEG
PSGKQGNIGPQGKPGPKGEAGPKGEVGAPGMQGSAGAKGPAGPKGERGAPGEQGAPGNAG
AAGPAGPAGPQGAPGSRGPPGLKGDRGAPGDRGIKGESGLPDSAALRQQMEALNGKLQRL
EAAFSRYKKAALFPDGQSVGDKIFRAANSEEPFEDAKEMCRQAGGQLASPRSATENAAVQ
QLVTAHSKAAFLSMTDVGTEGKFTYPTGEALVYSNWAPGEPNNNGGAENCVEIFTNGQWN
DKACGEQRLVICEF
NT seq 1125 nt   +upstreamnt  +downstreamnt
atgctgcactttctctccatgcttgtcctgcttgtacagcccctgggcgatctgggagca
gaaatgaagaccctctcgcagagatcaataaccaacacatgcaccctagtcttgtgtagt
ccaacagagaatggcctgcctggtcgtgatggacgggatggcagagagggtccacggggc
gagaagggtgatccaggtttgccaggacctatgggactctcagggttgcctggccctaga
ggtccagttgggcccaaaggagagaatggctctgctggagaacctggaccaaagggagaa
cgtggactagttggacctccaggatctccaggtatttctggtccggctggaaaagaaggc
ccctctgggaagcagggaaacataggaccccaaggcaaaccaggtcctaaaggagaggct
gggccgaaaggagaagtaggtgctcccggcatgcaaggatctgcaggggcaaaaggccct
gctggccccaaaggagaaagaggtgcccctggtgagcaaggagcccctgggaatgctggg
gcagcaggacctgccggacctgcgggtccacagggagctccaggttccagggggcctcca
ggactcaagggggacagaggtgctcctggagacagaggaatcaaaggcgaaagtggactt
ccagacagtgctgctctgaggcagcagatggaggctttgaatggaaaacttcagcgtcta
gaggctgccttttctcgctataagaaagccgcgctcttccctgatggccaaagtgttgga
gacaaaatcttcagggcggcaaactcggaagagccttttgaggatgccaaggagatgtgc
aggcaggccggagggcagctggcctccccacgttctgctactgagaatgctgcagtacag
cagctcgtcacagcccacagcaaagctgctttcctgagtatgacagatgtgggcacggag
ggcaagttcacttaccccacaggagaggccctggtctattctaactgggctccaggggag
cccaacaacaatggaggggcagagaactgtgtggagatcttcaccaatgggcagtggaat
gacaaggcttgtggagagcagcgcctggttatctgtgagttctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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