KEGG   Rattus norvegicus (rat): 25406
Entry
25406             CDS       T01003                                 
Symbol
Cd44
Name
(RefSeq) CD44 antigen precursor
  KO
K06256  CD44 antigen
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04512  ECM-receptor interaction
rno04640  Hematopoietic cell lineage
rno05169  Epstein-Barr virus infection
rno05205  Proteoglycans in cancer
rno05206  MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    25406 (Cd44)
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    25406 (Cd44)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    25406 (Cd44)
   05205 Proteoglycans in cancer
    25406 (Cd44)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    25406 (Cd44)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    25406 (Cd44)
   04090 CD molecules [BR:rno04090]
    25406 (Cd44)
   00535 Proteoglycans [BR:rno00535]
    25406 (Cd44)
   00536 Glycosaminoglycan binding proteins [BR:rno00536]
    25406 (Cd44)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   25406 (Cd44)
  Exosomal proteins of other body fluids (saliva and urine)
   25406 (Cd44)
  Exosomal proteins of colorectal cancer cells
   25406 (Cd44)
  Exosomal proteins of bladder cancer cells
   25406 (Cd44)
CD molecules [BR:rno04090]
 Proteins
  25406 (Cd44)
Proteoglycans [BR:rno00535]
 Cell surface proteoglycans
  Others
   25406 (Cd44)
Glycosaminoglycan binding proteins [BR:rno00536]
 Hyaluronan
  Cell surface receptors
   25406 (Cd44)
SSDB
Motif
Pfam: Xlink SUIM_assoc
Other DBs
NCBI-GeneID: 25406
NCBI-ProteinID: NP_037056
RGD: 2307
Ensembl: ENSRNOG00000006094
UniProt: O08779
Position
3:complement(109610824..109699776)
AA seq 779 aa
MDKVWWHTAWGLLCLLQLSLAQQQIDLNITCRYAGVFHVEKNGRYSISRTEAADLCEAFN
TTLPTMAQMELALSKGFETCRYGFIEGHVVIPRIHPNAICAANNTGVYILLASNTSHYDT
YCFNASAPLEEDCTSVTDLPNSFDGPVTITIVNRDGTRYSKKGEYRTHQEDIDASNIIDE
DVSSGSTIEKSTPEGYILHTDLPTSQPTGDRDDAFFIGSTLATIASTVYSKSHATAQKQN
NWIWSWFGNSQSTTQTQEPTTTATTALMTTPETPPKRQEAQNWFSWFFQPSESKSHLHTT
TKMPGTESNTNPTGWKPNEENEDETDKYPNFSGSGIDDDEDFISSTIATTPWVSAHTKQN
QERTQWNPIHSNPEVLLQTTTRMTDIDRNSTSAHGENWTQEPQPPFNNHEYQDEEETPHA
TSTTWAAPNSTTEEAATQKEKWFENEWQGKNPPTPSEDSHVTEGTTASGHNNHPSQRMTT
QSQEDVSWTDFFDPISHPMGQGHQTESKDTDSSHSTTLQPTAAPNTHLVEDLNRTGPLSV
TTPQSHSQNFSTLPGELEEGEDHPTTSVLPSSTKSGARRGGSLPRDTTTSLEGYTPQYPD
TMENGTLFPVTPAKTEVFGETEGTVATDSNFNVDGSLPGDGDSSMDPRGGFDTVTHGSEL
AGHSSGNQDSGVTTTSGPARRPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKKKLV
INSGNGTVEDRKPSELNGEASKSQEMVHLVNKEPTETPDQFMTADETRNLQSVDMKIGV
NT seq 2340 nt   +upstreamnt  +downstreamnt
atggacaaggtttggtggcacacagcttggggactactttgcctcttacagttgagcctg
gcacagcagcagatcgatttgaatataacctgccgttacgcaggtgtattccatgtggag
aaaaatggccgctacagtatctccaggactgaagcagctgacctctgcgaggctttcaat
accaccttgcccaccatggctcagatggagttagccctgagcaaggggtttgaaacatgc
aggtatgggttcatagaaggacacgtggtaatcccgaggatccaccccaacgctatctgt
gcagccaacaacacaggagtgtatatcctcctcgcatccaacacctcccactatgacaca
tattgcttcaatgcctcagctcctcttgaagaagactgtacatcagtcacagacctaccc
aattccttcgatggaccagttaccataactattgtcaaccgtgatggcacccgctacagc
aagaagggcgagtatagaacacaccaagaagacatcgatgcctcaaacattatagatgag
gatgtcagcagtggatccaccattgagaagagcaccccagaaggctacattttgcacacc
gaccttcccacttcacagcctactggagaccgggatgacgccttctttattgggagcacc
ctggccaccattgcctcaactgtgtactcaaaaagccatgcaacagctcagaaacaaaat
aactggatatggtcttggtttggtaattcacaatccacaactcagactcaggagcccaca
acaacagcaactacagccttgatgactacccctgaaacaccacccaagaggcaagaagcc
cagaactggttttcatggttttttcaaccatcagagtccaagagtcatcttcatacaaca
acgaagatgcctggtacggagtcaaataccaacccaacaggctggaagccaaatgaggaa
aatgaagatgaaacagacaaataccccaatttttctggatcaggcattgatgatgatgaa
gattttatctccagcaccattgcaactactccatgggtttctgcccacacaaaacagaac
caggaacggacccagtggaacccgatccattcaaacccagaagtactacttcagacaacc
accaggatgactgatatagacagaaacagcaccagtgctcatggagaaaactggacccag
gaaccacagcctcctttcaataaccatgagtatcaggatgaagaggagaccccacatgct
acaagcacaacctgggcagctcctaatagcacaacagaagaagcagctacccagaaggag
aagtggtttgagaatgaatggcaggggaagaacccacccaccccaagtgaagactcccat
gtgacagaagggacaactgcctcaggccacaacaaccatccaagtcaaagaatgacaaca
cagagtcaagaggatgtttcatggaccgatttcttcgacccaatctcacatccaatggga
caaggtcatcaaacagaaagcaaggatacagactccagtcatagtacaacccttcagcct
actgcggctccaaatacccatttggtggaagacttgaacaggacaggaccactttcagtg
acaactccacagagtcattctcagaacttctctacattacctggagagctggaagaaggc
gaagaccatccaacaacttctgttctgccatctagcactaagagtggtgcaagaagaggt
ggaagtcttcccagagatacaactacttcactggaaggctacacccctcaatatccagac
acaatggaaaacgggactctcttcccagtgacccctgctaagactgaggtctttggagaa
actgaagggactgttgctactgactccaactttaatgtggatggctccttaccaggtgat
ggagactcatccatggaccccaggggtggtttcgacactgtgactcatggatccgaatta
gctggacactcaagtgggaatcaagacagtggagtgaccacaacttctggtcctgcgagg
agacctcagattccagagtggcttatcatcttggcatccctcctggcgctggctctgatt
cttgccgtctgcattgctgtcaacagtaggagaaggtgtgggcagaagaagaagctggtg
atcaacagtggcaatggaacagtggaagacaggaaaccaagtgaactcaacggggaggcc
agcaagtctcaggaaatggtgcatttggtgaacaaggaaccaacagagactccggaccag
tttatgacagctgatgagacccggaatctgcagagtgtggatatgaagattggggtgtag

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