KEGG   Rattus norvegicus (rat): 25497
Entry
25497             CDS       T01003                                 
Symbol
Nup50
Name
(RefSeq) nuclear pore complex protein Nup50
  KO
K14295  nuclear pore complex protein Nup50
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03013  Nucleocytoplasmic transport
rno05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    25497 (Nup50)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    25497 (Nup50)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    25497 (Nup50)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     25497 (Nup50)
SSDB
Motif
Pfam: NUP50 Ran_BP1
Other DBs
NCBI-GeneID: 25497
NCBI-ProteinID: NP_037123
RGD: 3191
Ensembl: ENSRNOG00000013423
UniProt: O08587
Position
7:117927882..117945155
AA seq 467 aa
MAKRVAEKELTDRNWDEEDEVEEMGTFSVASEEVMKNRAVKKAKRRNIGFESDSGGAFKG
FKGLVVPSGGGGFSGFGGGSGGKPLEGLTNGNSTDSATPFSSAKTAAEPKAAFGSFAVNG
PTTLVDKKISSPKCNSSNQPPSSGPASSTSCTGNTYHKQLAGLNCSVRDWIVKHVNTNPL
CDLTPIFKDYERYLATIEKQLENGGSSSSESQTDRATAAMEPPSLFGSTKLQQDSPFSFH
GNKAEDTSEKLEFTAEKKSDAAQGATSASFNFGKKIESSVLGSLSSGSLTGFSFSPGNSS
LFGKDAAQSKAASSPFSAKASESQAGGSSSECRDGEEEESDEPPKVVVTEVKEEDAFYSK
KCKLFYKKDNEFKEKGVGTLHLKPTATQKTQLLVRADTNLGNILLNVLIPPNMPCTRTGK
NNVLIVCVPNPPLDEKQPTLPVTMLIRVKTSEDADELHKILLQKKDV
NT seq 1404 nt   +upstreamnt  +downstreamnt
atggcgaagagagttgcggagaaggaattaacagataggaattgggatgaagaagatgaa
gttgaagagatgggaacattctcagtggccagtgaggaagtcatgaagaacagagccgtg
aagaaggcaaagcgtaggaatattggctttgaatctgatagcggaggagcctttaaaggt
ttcaaagggttggttgtgccttctggaggaggagggttttctggatttggtggtggctct
ggagggaagcctctggaaggactgacaaatggaaacagcacagacagtgccacgcccttc
tccagtgcaaagacagcagcggagcctaaggcagcctttggttcttttgctgtgaatggc
cctactactttggtggataaaaagatctccagtcctaaatgcaatagcagcaatcagccg
ccctcctccggcccagcctccagtacctcctgcactgggaatacctatcataagcagttg
gctggcttgaactgctctgtccgggattggatagtgaagcatgttaacacaaacccactt
tgtgacctgacgcccatttttaaagactacgagagatacttagcgacgatcgagaagcag
ctggagaatgggggtagcagcagctcagagagccagacagacagggcgacggctgcaatg
gagcctccttccctttttggttcaacaaaactacagcaagattcaccattttcatttcat
ggcaacaaagcggaggacacatctgaaaagttggagtttacagcagaaaagaaatcggac
gcagcacaaggagcaacaagtgcctcgtttaattttggcaagaaaattgagagctcagtt
ttgggctctttaagctctggctccctaactgggttttcattctctcctggaaactctagt
ttatttggtaaagatgctgcccagagtaaagcagcctcttcaccgttttctgctaaagca
tccgagagtcaagcaggaggcagcagcagtgagtgcagagatggtgaagaagaggagagt
gacgagccacccaaggtggtggtgactgaagtgaaggaagaggatgctttctactccaaa
aaatgtaaactattttacaagaaagacaatgaatttaaagagaagggtgtggggaccctg
catttaaaacccacagcgactcagaagacccagctcttggtgcgggcagacaccaaccta
ggcaacattctgctgaatgttctgatcccacccaatatgccgtgcacccggacagggaag
aacaatgtccttatcgtctgtgtccccaaccccccacttgatgagaagcagcccactctc
ccggtcaccatgctgattcgggtgaagacgagcgaggatgccgatgagttgcacaagatt
ttactgcagaaaaaggacgtctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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