KEGG   Rattus norvegicus (rat): 25533
Entry
25533             CDS       T01003                                 
Symbol
Rabggtb
Name
(RefSeq) geranylgeranyl transferase type-2 subunit beta
  KO
K05956  geranylgeranyl transferase type-2 subunit beta [EC:2.5.1.60]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:rno01006]
    25533 (Rabggtb)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    25533 (Rabggtb)
Enzymes [BR:rno01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.60  protein geranylgeranyltransferase type II
     25533 (Rabggtb)
Prenyltransferases [BR:rno01006]
 Protein prenylation
  Rab geranylgeranyltransferase
   25533 (Rabggtb)
Membrane trafficking [BR:rno04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    25533 (Rabggtb)
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
    25533 (Rabggtb)
SSDB
Motif
Pfam: Prenyltrans SQHop_cyclase_C
Other DBs
NCBI-GeneID: 25533
NCBI-ProteinID: NP_619715
RGD: 3530
Ensembl: ENSRNOG00000009992
UniProt: Q08603 A6HWN7
Structure
Position
2:complement(245504586..245510878)
AA seq 331 aa
MGTQQKDVTIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGVYWGLTVMDLM
GQLHRMNKEEILVFIKSCQHECGGVSASIGHDPHLLYTLSAVQILTLYDSIHVINVDKVV
AYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGG
FGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVC
YSWWVLASLKIIGRLHWIDREKLRSFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSL
LGEEQIKPVSPVFCMPEDVLQRVNVQPELVS
NT seq 996 nt   +upstreamnt  +downstreamnt
atgggcacacagcagaaggacgtcaccatcaagtcagatgcgcctgacaccctgctgctc
gagaagcatgctgattatatcgcctcgtacggctcaaagaaagatgattatgaatactgc
atgtccgaatacttgagaatgagcggcgtctactggggcctgacagtgatggacctcatg
gggcagcttcatcggatgaataaagaggagatactggtgtttatcaagtcgtgccagcat
gagtgtgggggagtcagtgccagcatcgggcacgacccccaccttctctacacgctcagt
gctgtccagattctcactctgtatgatagcatccatgtaatcaacgtagacaaagtggta
gcctatgttcagagtctacagaaagaagatggttcctttgctggagacatctggggagaa
atcgatacaagattctcattttgtgcagtggcaactttggctctcttgggcaaacttgat
gctattaatgtggaaaaggccattgaatttgttttgtcctgtatgaactttgatggtgga
tttgggtgcagaccaggctctgaatctcacgccggacagatctattgttgcacaggattc
ctggccataactagtcagttgcatcaagtgaactccgacctacttggttggtggctttgt
gaacgacagttgccctctggcggactcaatggaagacccgagaagttaccagatgtgtgc
tattcctggtgggtgttggcctccttaaagataatcgggagacttcattggattgacaga
gaaaagcttcgaagcttcatcttggcatgtcaagatgaagagacaggagggtttgcagac
aggccaggagacatggtggatccctttcacaccttgtttggcattgctggattgtcactt
ctgggggaagagcagatcaagcctgtcagccctgtcttttgcatgcctgaagacgtgctg
cagagggtgaatgtccagcctgaactagtgagctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (24)   
   RefSeq(nuc) (6)   
   GenBank (9)   
   EMBL (9)   
3D Structure (18)   
   PDB (18)   
Protein domain (2)   
   Pfam (2)   
All databases (64)   

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