KEGG   Rattus norvegicus (rat): 25574
Entry
25574             CDS       T01003                                 
Symbol
Ubtf
Name
(RefSeq) nucleolar transcription factor 1 isoform 2
  KO
K09273  upstream-binding transcription factor
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    25574 (Ubtf)
   03021 Transcription machinery [BR:rno03021]
    25574 (Ubtf)
Transcription factors [BR:rno03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   UBF
    25574 (Ubtf)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase I system
   Other transcription-related factors
    UBF
     25574 (Ubtf)
SSDB
Motif
Pfam: HMG_box_5 HMG_box HMG_box_2 DUF4473 Chlor_dismutase
Other DBs
NCBI-GeneID: 25574
NCBI-ProteinID: NP_001121162
RGD: 3927
Ensembl: ENSRNOG00000020937
UniProt: P25977
Position
10:complement(87758346..87775377)
AA seq 764 aa
MNGEADCPTDLEMAAPKGQDRWSQEDMLTLLECMKNNLPSNDSSKFKTTESHMDWEKVAF
KDFSGDMCKLKWVEISNEVRKFRTLTELILDAQEHVKNPYKGKKLKKHPDFPKKPLTPYF
RFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFR
EDHPDLIQNAKKSDIPEKPKTPQQLWYTHEKKVYLKVRPDATTKEVKDSLGKQWSQLSDK
KRLKWIHKALEQRKEYEEIMRDYIQKHPELNISEEGITKSTLTKAERQLKDKFDGRPTKP
PPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEVELLR
FLESLPEEEQQRVLGEEKMLNINKKQTTSPASKKPSQEGGKGGSEKPKRPVSAMFIFSEE
KRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAALKAQSERKPGGEREDRGK
LPESPKRAEEIWQQSVIGDYLARFKNDRVKALKAMEMTWNNMEKKEKLMWIKKAAEDQKR
YERELSEMRAPPAATNSSKKMKFQGEPKKPPMNGYQKFSQELLSNGELNHLPLKERMVEI
GSRWQRISQSQKEHYKKLAEEQQRQYKVHLDLWVKSLSPQDRAAYKEYISNKRKNMTKLR
GPNPKSSRTTLQSKSESEEDDDEEDDDDDDEEEEEDDENGDSSEDGGDSSESSSEDESED
GDENEDDDDDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSDSN
NT seq 2295 nt   +upstreamnt  +downstreamnt
atgaacggagaagccgactgtcccacagacctggaaatggccgcccccaaaggccaagac
cgctggtcccaggaagatatgctaactttgctggaatgcatgaagaacaaccttccatcc
aatgacagctccaagttcaagaccacagagtcgcatatggactgggaaaaagtcgcattt
aaggatttttcaggagatatgtgcaagctcaaatgggtggagatttctaacgaggtaagg
aagttccgtactttgacagaattgatccttgatgctcaggaacatgttaaaaacccttac
aaaggcaaaaaactcaagaaacacccggattttccaaagaaacctctcaccccctacttc
cgcttcttcatggagaagcgggccaagtacgcgaaactccaccctgagatgagcaacctg
gacttgactaagatcctgtctaagaaatacaaggagcttccagagaagaagaagatgaaa
tatattcaggacttccagagggagaaacaggagttcgagcgaaacctggcccgattcagg
gaggatcaccctgaccttatccagaatgccaagaagtcggacatccccgagaagcccaaa
actccccagcaactgtggtacacccatgagaagaaggtgtatctcaaagtgcggccggat
gccactacgaaggaggtgaaggactccctggggaagcagtggtctcagctctcggacaaa
aagaggctgaaatggattcataaggccctggagcagcggaaggagtacgaggagattatg
cgtgattatatccagaagcaccctgagctaaacatcagcgaggaaggtatcaccaagtct
accctcactaaggccgaacgccagctcaaggacaaatttgatggacgacccaccaagcca
cctccgaacagctactccctgtactgtgcagagctcatggcaaacatgaaggatgtgccc
agcacagagcgcatggtgctatgcagccagcagtggaagctgctctcccagaaggaaaag
gatgcttatcacaagaagtgtgaccagaaaaagaaagattatgaagtggagctgctgcgg
ttccttgagagcttgccagaggaagagcagcagcgggtcctgggagaggagaagatgttg
aacatcaataagaagcagaccaccagtccagcctccaagaagccttcacaggaaggtggc
aaaggtggttcggagaagcccaagcggcctgtgtctgccatgttcatcttctcagaggag
aagagaaggcagcttcaggaggaacgacctgagctctcagaaagtgagctgacccgcctg
ctggcccgcatgtggaacgacttgtccgagaagaagaaggctaaatataaggcccgggag
gccgcgctgaaggcacagtccgagaggaagcctggcggagagcgtgaagataggggcaag
ttgccagagtcgcccaagagagctgaggagatctggcagcagagtgtcatcggagactat
ctggcccgctttaagaatgaccgggtgaaagccttgaaagccatggagatgacgtggaac
aacatggagaagaaggagaagctcatgtggattaagaaggctgcagaagaccaaaaacga
tatgagagagagttaagtgagatgcgggcccctccagctgctacgaactcttccaagaag
atgaagttccagggagagcccaagaaaccgcctatgaacggttaccagaagttctcccag
gagctgctgtccaatggggaactaaatcacctgccactcaaggagcgcatggtggagatc
ggcagccgttggcagcgcatctcccagagccagaaggagcactataagaagctggctgag
gaacagcagaggcagtacaaggtgcacttggacctctgggtcaagagcctatctccccag
gaccgcgcagcatacaaagaatacatctccaataaacgtaagaacatgactaagcttcga
ggcccaaaccccaagtctagccggaccaccctgcagtccaagtcggagtcagaggaagac
gacgatgaggaagatgatgatgatgatgacgaggaggaagaggaagatgatgagaacggc
gactcgtccgaggacggtggggattcttctgagtcgagcagtgaagatgaaagcgaggac
ggggatgagaatgaggatgatgacgacgacgaggatgacgacgaggatgacgatgaggat
gaagacaacgagtctgagggcagtagctccagctcctcatcttcaggggactcctcagat
tctgactccaattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (10)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (8)   
DNA sequence (14)   
   RefSeq(nuc) (8)   
   GenBank (3)   
   EMBL (3)   
Protein domain (5)   
   Pfam (5)   
All databases (39)   

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