KEGG   Rattus norvegicus (rat): 25593
Entry
25593             CDS       T01003                                 
Symbol
Hcrtr1
Name
(RefSeq) orexin/Hypocretin receptor type 1
  KO
K04238  hypocretin (orexin) receptor 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04080  Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    25593 (Hcrtr1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:rno04030]
    25593 (Hcrtr1)
G protein-coupled receptors [BR:rno04030]
 Rhodopsin family
  Peptide
   Orexin
    25593 (Hcrtr1)
SSDB
Motif
Pfam: 7tm_1 7TM_GPCR_Srw 7TM_GPCR_Srsx 7tm_4 Orexin_rec2 Form_Nir_trans
Other DBs
NCBI-GeneID: 25593
NCBI-ProteinID: NP_037196
RGD: 2787
Ensembl: ENSRNOG00000013838
UniProt: P56718 A6ISN2
Position
5:complement(147761392..147771846)
AA seq 416 aa
MEPSATPGAQPGVPTSSGEPFHLPPDYEDEFLRYLWRDYLYPKQYEWVLIAAYVAVFLIA
LVGNTLVCLAVWRNHHMRTVTNYFIVNLSLADVLVTAICLPASLLVDITESWLFGHALCK
VIPYLQAVSVSVAVLTLSFIALDRWYAICHPLLFKSTARRARGSILGIWAVSLAVMVPQA
AVMECSSVLPELANRTRLFSVCDERWADELYPKIYHSCFFFVTYLAPLGLMGMAYFQIFR
KLWGPQIPGTTSALVRNWKRPSEQLEAQHQGLCTEPQPRARAFLAEVKQMRARRKTAKML
MVVLLVFALCYLPISVLNVLKRVFGMFRQASDREAVYACFTFSHWLVYANSAANPIIYNF
LSGKFREQFKAAFSCCLPGLGPSSSARHKSLSLQSRCSVSKVSEHVVLTTVTTVLS
NT seq 1251 nt   +upstreamnt  +downstreamnt
atggaaccctcagccacgcctggggcccagcccggagtccccactagcagtggggaaccc
ttccacctgcctccagactatgaggacgagttcctccgctacctgtggcgcgattatctc
tatccgaagcagtacgagtgggttctcatcgcggcctacgtggccgtgtttctcatagcc
ttggtgggcaacactctggtctgcctggctgtgtggcggaaccaccacatgaggacagtc
accaactacttcattgtcaacctgtccctggcagatgtgctggtgactgccatctgcctg
cctgccagcctgttagtggacatcaccgaatcatggctcttcggccatgccttgtgcaag
gtcatcccctatctccaggccgtgtcggtgtcagtggcagtgctgactctcagcttcatc
gccctggaccgctggtatgccatctgccaccctctgctgttcaagagcacagctcgccgt
gcccgtggctccatcctgggcatctgggctgtgtcgctggctgtcatggtgccccaggcc
gctgtcatggaatgcagcagtgttctgcccgagctagccaatcgcacacggctcttctct
gtctgtgatgagcgctgggcagatgaactctaccctaagatctaccacagctgcttcttc
tttgtcacctacctggccccgctgggcctcatgggcatggcctatttccagatcttccgc
aagctctggggcccccagatcccgggtaccacatcggccttggtgcggaactggaagcga
ccctcagagcaactggaagctcagcaccagggcctgtgtacagagccccaaccccgggcc
cgagccttcctggccgaggtgaagcagatgcgagctcggaggaagactgccaagatgctg
atggtggttctgctggtttttgcactctgttatctgcccatcagtgtcctcaatgtcctt
aaaagagtgtttgggatgtttcgccaagccagcgaccgggaagctgtctacgcctgcttc
accttctcccactggctggtgtacgccaacagtgcggccaaccctatcatctacaacttc
ctcagtggcaaatttcgggagcagttcaaggctgcattctcctgctgcctgcctggtctg
ggtcccagctcctctgccagacacaagtccttgtccttgcagagccggtgttctgtctcc
aaagtctctgagcatgttgtgctgaccacagtcactacagtgctgtcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (27)   

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