KEGG   Rattus norvegicus (rat): 25596
Entry
25596             CDS       T01003                                 
Symbol
Rpn1
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 precursor
  KO
K12666  dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 1 (ribophorin I)
Organism
rno  Rattus norvegicus (rat)
Pathway
rno00510  N-Glycan biosynthesis
rno00513  Various types of N-glycan biosynthesis
rno01100  Metabolic pathways
rno04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:rno00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    25596 (Rpn1)
   00513 Various types of N-glycan biosynthesis
    25596 (Rpn1)
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    25596 (Rpn1)
SSDB
Motif
Pfam: Ribophorin_I DNA_repr_REX1B FliD_C CtIP_N
Other DBs
NCBI-GeneID: 25596
NCBI-ProteinID: NP_037199
RGD: 3594
Ensembl: ENSRNOG00000046345
UniProt: Q6P7A7 M0R941
Position
4:122100976..122122382
AA seq 606 aa
MEAPIVLLLLLWLGALAPTPGSASSEAPPLVNEDVKRTVDLSSHLAKVTAEVVLAHPGGG
STARASSFVLALEPELESRLAHLGVQVKGEDEEDNNLEVRETKMKGKSGRFFTVKLPVAL
DPGSKISIVVETVYTHVLHPYPTQITQSEKQFVVFEGNHYFYSPYPTKTQTMRVRLASRN
VESHTKLGNPSRSEDILDYGPFKDIPAYSQDTFKVHYENNSPFLTITSMTRVIEVSHWGN
IAVEENVDLKHTGAVLKGPFSRYDYQRQPDSGISSIRSFKTILPAAAQDVYYRDEIGNVS
TSHLLILDDSVEMEIRPRFPLFGGWKTHYIVGYNLPSYEYLYNLGDQYALKMRFVDHVFD
EQVIDSLTVKIILPEGAKNIQVDSPYDISRAPDELHYTYLDTFGRPVIVAYKKNLVEQHI
QDIVVHYTFNKVLMLQEPLLVVAAFYILFFTVIIYVRLDFSITKDPAAEARMKVACITEQ
VLTLVNKRLGLYRHFDETVNRYKQSRDISTLNSGKKSLETEHKAVTSEIAVLQSRLKTEG
SDLCDRVSEMQKLDAQVKELVLKSAVEAERLVAGKLKKDTYIENEKLSSGKRQELVTKID
HILDAL
NT seq 1821 nt   +upstreamnt  +downstreamnt
atggaggcgccgatcgtcttgctgctgctgctatggctcggggccttggccccgacgccc
ggcagcgcctcttcggaggctccgccgctggtcaacgaggacgtgaagcgcacggtggac
ctgagcagccacctagccaaggtgacggctgaggtggtcctggcgcacccgggcggcggc
tctacagcacgagccagctctttcgttctggccctggagcccgaactggagtcgcgactt
gcacacctaggcgtgcaggtaaagggagaagatgaggaagacaacaacctagaagtacga
gaaaccaaaatgaaggggaaaagtgggaggtttttcaccgtcaagctcccagttgctctt
gatcctgggtccaagatctcaatcgttgtggaaactgtctacacccatgtgcttcatcca
tacccgactcagataactcagtcagagaaacagtttgtggtgtttgagggcaaccattac
ttctactctccctatccaacaaagacccagaccatgcgagtgagacttgcttcccgaaat
gtggagagccataccaagctggggaacccctcaaggtctgaggacatcctggactatggg
ccttttaaagacatccctgcctacagtcaggatactttcaaagtacattatgagaacaat
agccctttcctgaccatcaccagtatgacccgggtcattgaggtttctcactggggcaat
attgctgtggaagagaacgtggacttgaagcatacaggtgcggtgctgaagggacctttc
tcccgctacgattaccagaggcagcctgacagtgggatctcctccattcgttcttttaag
accatccttcctgctgctgcccaggatgtgtattaccgggatgaaatcggtaatgtttcc
accagccacctccttattttggatgactccgtggaaatggaaatccggcctcgatttcct
ctctttggagggtggaagacacactacatcgttggttacaacctcccaagctatgagtac
ctctataatctgggtgaccagtatgcactgaagatgcggtttgtagaccacgtgtttgat
gagcaagtgatagattctctgacagtgaagatcatccttcctgagggagccaagaacatc
caggtagacagtccctacgatattagccgggccccagatgagctgcattacacctaccta
gacacattcggccgcccggtgattgttgcttacaagaagaatctagttgaacagcacatt
caggacattgtggtgcactacacattcaacaaggtgctcatgctgcaggagcctctgctg
gttgtggccgccttctacatcctgttcttcaccgtcatcatctacgtccgtctagacttt
tccatcaccaaggacccagcagcagaagccaggatgaaagtggcctgtatcacagagcag
gtcttaaccctggtcaacaagaggttaggcctctaccgtcactttgatgagactgtcaat
agatacaagcagtcccgggacatctctaccctcaatagtggcaagaagagcctagagaca
gagcacaaagctgtgaccagtgagattgctgtgctgcagtctaggctgaagacggagggc
tctgacctgtgtgacagggtgagcgaaatgcagaagctggacgcgcaggtcaaggagctg
gtactgaagtctgcggtggaggcagagaggctggtggctggcaagctcaagaaggacaca
tacatcgagaatgaaaagctcagctcaggaaaacgccaggagctggtcaccaagatcgac
cacatcctggacgctctgtag

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Ontology (1)   
   KEGG BRITE (1)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (15)   
   RefSeq(nuc) (1)   
   GenBank (7)   
   EMBL (7)   
Protein domain (4)   
   Pfam (4)   
All databases (38)   

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