KEGG   Rattus norvegicus (rat): 25640
Entry
25640             CDS       T01003                                 
Symbol
Hnf1b
Name
(RefSeq) hepatocyte nuclear factor 1-beta isoform 2
  KO
K08034  transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04950  Maturity onset diabetes of the young
Brite
KEGG Orthology (KO) [BR:rno00001]
 09160 Human Diseases
  09167 Endocrine and metabolic disease
   04950 Maturity onset diabetes of the young
    25640 (Hnf1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    25640 (Hnf1b)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain POU
    25640 (Hnf1b)
SSDB
Motif
Pfam: HNF-1B_C HNF-1_N Homeodomain Homeobox_KN APP1_cat
Other DBs
NCBI-GeneID: 25640
NCBI-ProteinID: NP_037235
RGD: 3830
Ensembl: ENSRNOG00000002598
UniProt: P23899
Position
10:69233377..69287360
AA seq 557 aa
MVSKLTSLQQELLSALLSSGVTKEVLIQALEELLPSPNFGVKLETLPLSPGSGADLDTKP
VFHTLTNGHAKGRLSGDEGSEDGDDYDTPPILKELQALNTEEAAEQRAEVDRMLSEDPWR
AAKMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREIL
RQFNQTVQSSGNMTDKSSQDQLLFLFPEFSQQNQGPGQSEDACSEPTNKKMRRNRFKWGP
ASQQILYQAYDRQKNPSKEEREALVEECNRAECLQRGVSPSKAHGLGSNLVTEVRVYNWF
ANRRKEEAFRQKLAMDAYSSNQTHNLNPLLTHGSPHHQPSSSPPNKLSGVRYSQPGNNEV
TSSSTISHHGNSAMVTSQSVLQQVSPASLDPGHSLLSPDSKMISVSGGGLPPVSTLTNIH
SLSHHNPQQSQNLIMTPLSGVMAIAQSLNTSQAQGVPVINSVASSLAALQPVQFSQQLHS
PHQQPLMQQSPGSHMAQQPFMAAVTQLQNSHMYAHKQEPPQYSHTSRFPSAMVVTDTSSI
NTLTSMSSSKQCPLQAW
NT seq 1674 nt   +upstreamnt  +downstreamnt
atggtgtccaagctcacgtctctccagcaagaactcctgagtgccctgctgagctccgga
gtcaccaaggaagtgctgatccaggccttggaggaattactgccgtccccgaatttcggg
gtgaagctggagacactgcccctgtcccccgggagcggggcggatctcgacaccaagccg
gttttccatactctcaccaatggccacgccaagggccgcttgtctggggacgagggctca
gaggacggcgacgactatgacactcctcccatcctcaaagagctccaggcgctcaacacc
gaggaggccgcggagcagcgggccgaggtggaccggatgctcagtgaggacccatggagg
gccgccaaaatgatcaagggatacatgcaacagcacaacatcccccagagggaggtggtt
gatgtcacaggcctgaaccaatcccacctttctcaacacctcaacaagggcacccccatg
aagacccagaagcgagctgccctgtacacctggtacgtcagaaagcaacgggagatcctc
cgacagttcaaccagacagtccagagctctggaaacatgacagacaaaagcagtcaggat
cagctgctatttctctttccagagttcagtcaacagaaccagggccctgggcagtcggag
gacgcctgctctgagcccaccaacaagaagatgcgccgcaaccggttcaaatgggggccc
gcatcccagcaaattttgtaccaggcctacgaccggcaaaagaatcccagcaaggaagag
agggaggccttagtggaggagtgtaacagggcagaatgtttgcaacgaggggtctccccc
tccaaagcccatggcctaggctccaacttggtcacggaggtccgtgtctacaactggttt
gcaaaccgccggaaggaagaggcattcagacagaagctggccatggatgcctatagctcc
aaccagacgcacaacttgaaccccctgctcacccatggctcccctcaccaccagccaagc
tcctctccacccaacaagttgtcaggagtacgctacagccaaccgggaaacaatgaggtc
acttcctcttcgacaatcagtcaccatggtaacagtgccatggtgaccagccagtcagtt
ttacaacaagtctccccggccagcctggacccaggccacagtctcctctcacctgacagt
aaaatgatctcggtgtctggaggaggactgcccccggtcagcaccttgacgaatatccac
agcctctcccaccacaatccccagcaatctcaaaacctcatcatgactcccctgtccgga
gtcatggccattgcacagagcctcaacacctcccaagcccagggtgtcccagtcatcaac
agtgtggctagcagcctggcagccctacagcccgtccagttctctcaacagctgcacagc
cctcaccagcagcccctcatgcagcagagcccaggcagtcacatggcccagcagcccttc
atggctgcggtgactcagctacagaactcccacatgtatgcacataagcaggagccccct
cagtattcccacacctcccggttcccatctgcaatggtggtcacagataccagtagcatc
aataccctcaccagcatgtcttccagtaaacagtgtccactgcaagcctggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (13)   
   RefSeq(nuc) (3)   
   GenBank (5)   
   EMBL (5)   
Protein domain (5)   
   Pfam (5)   
All databases (33)   

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