KEGG   Rattus norvegicus (rat): 25648
Entry
25648             CDS       T01003                                 
Symbol
Slc7a1
Name
(RefSeq) high affinity cationic amino acid transporter 1
  KO
K13863  solute carrier family 7 (cationic amino acid transporter), member 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno05206  MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:rno00001]
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    25648 (Slc7a1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:rno02000]
    25648 (Slc7a1)
Transporters [BR:rno02000]
 Solute carrier family (SLC)
  SLC7: Cationic amino acid transporter/glycoprotein-associated
   25648 (Slc7a1)
SSDB
Motif
Pfam: AA_permease_2 AA_permease AA_permease_C
Other DBs
NCBI-GeneID: 25648
NCBI-ProteinID: NP_001386911
RGD: 3716
Ensembl: ENSRNOG00000000924
Position
12:11664488..11740030
AA seq 624 aa
MGCKNLLSLGQQMLRRKVVDCSREESRLSRCLNTYDLVALGVGSTLGAGVYVLAGAVARE
NAGPAIVISFLIAALASVLAGLCYGEFGARVPKTGSAYLYSYVTVGELWAFITGWNLILS
YIIGTSSVARAWSATFDELIGKPIGEFSRQHMALNAPGVLAQTPDIFAVIIIIILTGLLT
LGVKESAMVNKIFTCINVLVLCFIMVSGFVKGSIENWQLTENKSSPLCGNNDTNVKYGEG
GFMPFGFSGVLSGAATCFYAFVGFDCIATTGEEVKNPQKAIPVGIVASLLICFIAYFGVS
AALTLMMPYFCLDTDSPLPGAFKYRGWEEAKYAVAVGSLCALSTSLLGSMFPMPRVIYAM
AEDGLLFKFLAKINDRTKTPIIATVTSGAIAAVMAFLFELKDLVDLMSIGTLLAYSLVAA
CVLVLRYQPEQPNLVYQMARTTDELDQVDQNEMVSASESQTGFLPAAEKFSLKTILSPKN
MEPSKFSGLIVNISAGLLAVLIITVCIVAVLGREALAEGTLWAVFVMTGSVLLCMLVTGI
IWRQPESKTKLSFKVPFVPVLPVLSIFVNIYLMMQLDQGTWVRFAVWMLIGFAIYFGYGV
WHSEEASLAAGQAKTPDSNLDQCK
NT seq 1875 nt   +upstreamnt  +downstreamnt
atgggctgcaaaaacctgttgagcctgggtcagcagatgctgcgccggaaagtggtggac
tgcagccgggaggagagccggctgtcccgctgcctcaacacctatgatctggtagctctt
ggggtgggcagcaccttgggtgctggtgtctacgtcctagccggtgcagtggcccgtgag
aatgctggtcctgccatcgtcatctccttcctgatcgctgctcttgcctcagtgctggcc
ggcctgtgctatggcgagtttggtgcccgtgtccccaagacgggctcagcctacctctac
agctatgtgacagtgggggagctctgggccttcatcactggctggaacctgattctctcc
tacatcatcggtacatccagcgtggcaagagcctggagtgcaacttttgacgagctgata
ggcaaacccatcggagagttctcgcgtcaacacatggccctgaacgcccctggggtgctg
gcccaaaccccggatatatttgctgtgattataattatcatcctgacaggactgttaact
ctcggtgtgaaagaatcagccatggtcaacaaaatcttcacctgtatcaatgtcctggtc
ttgtgcttcatcatggtgtcgggatttgtgaaaggctccattgagaactggcagctcacg
gagaataaatccagtcctctctgtgggaacaatgacacaaacgtgaaatacggtgaggga
gggttcatgccctttggattctctggtgtcctgtcaggggcagcgacctgcttttatgcc
ttcgtgggctttgactgcatcgccaccacaggggaagaagtcaagaacccccagaaggcc
attcctgtgggcatcgtggcgtccctcctcatttgcttcatagcttactttggggtgtcc
gctgctctcaccctcatgatgccctacttctgcctggacactgacagcccactgcctggc
gccttcaagtacaggggctgggaagaagctaagtatgcagtggccgtgggctccctctgc
gcactctccaccagtctcctaggttccatgttccccatgccccgagttatctatgccatg
gctgaagatggactactgtttaaatttttggccaaaatcaacgataggaccaaaacacca
ataatcgctactgtgacctcaggcgccatcgctgctgtgatggccttcctctttgaactg
aaggatctggtggacctcatgtccattggtactctcctggcttactctttggtggctgcc
tgtgttttggtcttacggtaccagccagaacaacctaatctggtataccagatggccaga
accaccgatgagctagaccaggtagaccagaatgagatggtcagtgccagtgagtcccag
acaggctttttaccagcagccgagaagttttctctgaaaaccatactctcacccaagaac
atggagccgtccaaattctcagggctaattgtgaacatttcagccggcctcctagccgtt
cttatcatcaccgtgtgcattgtggccgtgcttggaagagaggccctggctgaagggacg
ctgtgggcagtctttgtaatgacagggtcagtcctcctctgcatgctggtgacgggcatc
atctggaggcagcctgagagcaagaccaagctctcgtttaaggtaccctttgtccccgta
cttcctgtcttaagcatctttgtgaacatctatctcatgatgcaactggaccagggcacg
tgggtccggttcgcagtgtggatgctgataggctttgccatctactttggctatggggtc
tggcacagtgaggaagcatccctggctgctggccaggcaaagactcctgacagcaacttg
gaccagtgcaaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (11)   
   RefSeq(nuc) (3)   
   GenBank (4)   
   EMBL (4)   
Protein domain (3)   
   Pfam (3)   
All databases (27)   

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