KEGG   Rattus norvegicus (rat): 25671
Entry
25671             CDS       T01003                                 
Symbol
Smad1
Name
(RefSeq) mothers against decapentaplegic homolog 1
  KO
K04676  mothers against decapentaplegic homolog 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04350  TGF-beta signaling pathway
rno04390  Hippo signaling pathway
rno04550  Signaling pathways regulating pluripotency of stem cells
rno05202  Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    25671 (Smad1)
   04390 Hippo signaling pathway
    25671 (Smad1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    25671 (Smad1)
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    25671 (Smad1)
SSDB
Motif
Pfam: MH2 MH1 IRF-3 DUF4223
Other DBs
NCBI-GeneID: 25671
NCBI-ProteinID: NP_037262
RGD: 3030
Ensembl: ENSRNOG00000018483
UniProt: P97588 Q6P7A6
Position
19:45417430..45477962
AA seq 468 aa
MNVTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSCPGQ
PSNCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCEFPFGSKQKEV
CINPYHYKRVESPVLPPVLVPRHSEYNPQHSLLAQFRNLGQNEPHMPLNATFPDSFQQPH
SHPFPQSPNSSYPNSPGSSSSTYPHSPTSSDPGSPFQMPADTPPPAYLPPEDPMAQDGSQ
PMDTNMTNMTAPTLPAEINRGDVQAVAYEEPKHWCSIVYYELNNRVGEAFHASSTSVLVD
GFTDPSNNKNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQS
RNCNYHHGFHPTTVCKIPSGCSLKIFNNQEFAQLLAQSVNHGFETVYELTKMCTIRMSFV
KGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgaatgtgaccagcttgttttcattcacaagcccagctgtgaagagactccttgggtgg
aaacagggcgacgaagaagagaaatgggcggagaaggctgtggacgctttggtgaagaaa
ctgaagaagaagaaaggggccatggaagagctggagaaggccctgagctgccccgggcag
ccgagtaactgtgtcaccattcctcgctccctggatggcaggttgcaggtgtcccaccgg
aagggactgcctcatgtcatttattgccgcgtgtggcgctggcccgacctccagagccat
catgaactaaagcctctggaatgctgcgagttcccatttggttccaagcagaaggaagtc
tgcatcaatccctaccactataagcgagtggagagccccgttctcccaccggtgctggtt
ccgaggcacagcgagtacaaccctcagcacagccttctggctcagttccgaaacctggga
caaaatgagccccacatgccactgaatgccacgttccccgactccttccagcagccacac
agccacccgtttccccagtcccccaacagcagctaccccaactctcctggcagcagcagc
agcacctaccctcactccccgaccagctcagacccgggcagcccttttcagatgccagcc
gacacacccccgcctgcttacctgcctcctgaagaccccatggcccaggatggctctcag
cctatggacacgaacatgacgaacatgacggcaccgacactgcccgcggagatcaataga
ggagatgttcaagcagttgcttacgaggaaccaaaacactggtgctctattgtgtactat
gagctcaacaaccgtgtgggcgaagcgttccatgcctcctccaccagcgtgttggtggat
ggtttcaccgatccttccaacaataagaaccgattctgccttgggctgctctccaatgtt
aaccggaactccactattgaaaataccaggcgacacatcgggaaaggagtccacctttat
tacgtcggaggagaggtgtatgcggagtgcctcagtgacagcagcatcttcgtgcagagt
cggaactgcaactaccaccatggctttcatcccaccacggtctgcaagatccccagcggg
tgcagcttgaaaatcttcaacaaccaagagttcgctcagctactggcgcagtctgtgaac
catgggttcgagacagtgtatgaactcaccaaaatgtgcactattcgaatgagcttcgtg
aagggctggggagcagagtaccaccggcaggatgtcactagcaccccctgctggattgag
atacacctgcatggccctctccagtggctggataaagtccttacccagatgggttcgccc
cacaaccctatttcgtcggtgtcttaa

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (10)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (7)   
DNA sequence (13)   
   RefSeq(nuc) (7)   
   GenBank (3)   
   EMBL (3)   
Protein domain (4)   
   Pfam (4)   
All databases (39)   

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