KEGG   Rattus norvegicus (rat): 25687
Entry
25687             CDS       T01003                                 
Symbol
Cald1
Name
(RefSeq) non-muscle caldesmon isoform 2
  KO
K12327  caldesmon
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04270  Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09153 Circulatory system
   04270 Vascular smooth muscle contraction
    25687 (Cald1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    25687 (Cald1)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Others
     25687 (Cald1)
SSDB
Motif
Pfam: Caldesmon
Other DBs
NCBI-GeneID: 25687
NCBI-ProteinID: NP_037278
RGD: 2256
Ensembl: ENSRNOG00000010233
UniProt: Q62736
Position
4:64232906..64414085
AA seq 531 aa
MLSRSGSQGRRCLATLSQIAYQRNDDDEEEAARERRRRARQERLRQKQEEESLGQVTDQV
EAHVQNSVPDEESKPATANAQVEGDEEAALLERLARREERRQKRLQEALERQKEFDPTIT
DGSLSVPSRRMQNNSAENETAEGEEKGESRSGRYEMEETEVVITSYQKNSYQDAEDKKKE
EKEEEEEEEKLKGGNLGENQIKDEKIKKDKEPKEEVKNFLDRKKGFTEVKAQNGEFMTHK
LKQTENAFSPSRSGGRASGDKEAEGAPQVEAGKRLEELRRRRGETESEEFEKLKQKQQEA
ALELEELKKKREERRKVLEEEEQRRKQEEADRKAREEEEKRRLKEEIERRRAEAAEKRQK
MPEDGLSEDKKPFKCFTPKGSSLKIEERAEFLNKSVQKSGVKSTHQAAVVSKIDSRLEQY
TNAIEGTKASKPMKPAASDLPVPAEGVRNIKSMWEKGSVFSSPSASGTPNKETAGLKVGV
SSRINEWLTKSPDGNKSPAPKPSDLRPGDVSGKRNLWEKQSVDKVTSPTKV
NT seq 1596 nt   +upstreamnt  +downstreamnt
atgcttagcagatccgggtcccagggaaggcgctgcctggccacactctctcaaattgcc
tatcagaggaatgatgatgacgaagaagaggctgccagggaacggcgccgccgagcccga
caggaaaggctgcggcagaagcaagaggaagaatccttgggacaggtgacagaccaagtg
gaggcccatgtccagaacagtgtccccgatgaagagtctaagccagccactgcaaatgct
caggtagaaggtgatgaggaggctgctttgctggagcgcctggccaggcgagaagagaga
cgtcaaaaacgccttcaggaagccttagagcgtcagaaggagtttgatccaaccataacc
gatggcagtctctcagtcccaagcagaaggatgcaaaataactcggctgaaaatgagaca
gcagagggggaagaaaaaggagagagtcgctcaggacggtatgagatggaagaaacagaa
gtggtcatcacgtcctaccagaagaacagctatcaggatgctgaagacaaaaagaaagaa
gaaaaggaggaggaggaggaggaagagaagctgaagggagggaaccttggcgaaaatcag
atcaaagatgagaagattaaaaaggacaaagagcccaaagaagaagtcaagaacttcttg
gatcgaaagaaaggatttacagaagtgaaggcgcagaatggagaattcatgacccacaaa
cttaaacaaactgagaatgctttcagccccagccgttcaggaggccgggccagcggggac
aaggaagctgaaggcgccccacaagtggaagccggtaagaggctggaagagctgcgccga
cgccgtggggagacagagagcgaagagttcgaaaaactcaaacaaaagcaacaggaggca
gccttggagctggaagagctgaagaaaaagagggaagagagaaggaaggttctggaggaa
gaggagcagagaaggaagcaggaggaggctgatcgaaaagctagagaggaggaagagaag
aggaggttgaaggaagagatcgaaaggagaagggcagaagctgctgagaaacgccagaag
atgccggaagatggcctatctgaggacaagaagccgttcaagtgcttcactcctaaaggc
tcatctctcaagatagaggagcgagcagagtttttgaataagtctgtgcagaaaagtggt
gtcaaatcaactcatcaagcagctgtggtctccaagattgacagccggctggagcaatat
accaatgcaatcgagggaacgaaagcttcaaaacctatgaagcctgcagcatccgatctt
cctgtccctgcagaaggtgtccgcaatatcaagagcatgtgggagaaagggagtgtgttt
tcatccccctctgcctcggggacaccaaataaggaaactgctggcctgaaggtgggggtt
tccagccgcatcaatgaatggctaactaaatcgccggacggcaacaagtcacccgctccc
aagccttctgacttaaggccaggagatgtatctggcaagcggaacctctgggaaaagcaa
tccgtggataaggtcacttctcccactaaggtctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (22)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (20)   
DNA sequence (22)   
   RefSeq(nuc) (20)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (55)   

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