KEGG   Rattus norvegicus (rat): 25696
Entry
25696             CDS       T01003                                 
Symbol
Vldlr
Name
(RefSeq) very low-density lipoprotein receptor precursor
  KO
K20053  very low-density lipoprotein receptor
Organism
rno  Rattus norvegicus (rat)
Pathway
rno05017  Spinocerebellar ataxia
rno05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05017 Spinocerebellar ataxia
    25696 (Vldlr)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    25696 (Vldlr)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    25696 (Vldlr)
Membrane trafficking [BR:rno04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Low-density lipoprotein receptor (LDLR) family proteins
    25696 (Vldlr)
SSDB
Motif
Pfam: Ldl_recept_a Ldl_recept_b FXa_inhibition cEGF EGF_CA SGL EGF hEGF
Other DBs
NCBI-GeneID: 25696
NCBI-ProteinID: NP_037287
RGD: 3963
Ensembl: ENSRNOG00000027491
UniProt: F1LPV2
Position
1:234239769..234272150
AA seq 873 aa
MGTSARWALWLLLALCWAPRDSGATASGKKAKCDSSQFQCTNGRCITLLWKCDGDEDCTD
GSDEKNCVKKTCAESDFVCKNGQCVPNRWQCDGDPDCEDGSDESPEQCHMRTCRINEISC
GARSTQCIPESWRCDGENDCDNGEDEENCGNITCSADEFTCSSGRCVSRNFVCNGQDDCD
DGSDELDCAPPTCGAHEFQCSTSSCIPLSWVCDDDADCSDQSDESLEQCGRQPVIHTKCP
TSEIQCGSGECIHKKWRCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGI
RDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDITKVCDQEQDCRDWSDEPLKECHINEC
LVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDIDECQNPGICSQICINLKGGYKCE
CSRGYQMDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEYIQLVEQLRNTVALDADIAA
QKLFWADLSQKAIFSASIDDKVGRHFKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVA
TLDGTKRKFLFNSDLREPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTEDIQ
WPNGITLDLVKSRLYWLDSKLHMLSSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWI
DGENEAVYGANKFTGSELATLVNNLNDAQDIIIYHELVQPSGKNWCEEDMENGGCEYLCL
PAPQINDHSPKYTCSCPNGYNLEENGRECQSTSTPVTYSETKDVNTTDILRTSGLVPGGI
NVTTAVSEVSVPPKGTSAAWAILPLLLLVMAAVGGYLMWRNWQHKNMKSMNFDNPVYLKT
TEEDLSIDIGRHSASVGHTYPAISVVSTDDDLA
NT seq 2622 nt   +upstreamnt  +downstreamnt
atgggcacgtccgcgcgttgggcgctgtggctgctgctcgcgctgtgctgggcgccccgg
gacagcggcgccactgcaagcgggaagaaagccaaatgtgacagctcccaattccagtgc
acaaatggtcgctgcattactctgctgtggaaatgtgatggagacgaagactgtactgat
ggcagtgacgagaagaactgtgtgaagaagacatgtgctgagtcagacttcgtgtgcaaa
aacggccagtgtgttcccaacagatggcagtgtgatggggaccctgattgtgaagatggt
tctgatgaaagcccagaacagtgccatatgagaacatgccgcataaatgaaatcagctgt
ggcgcccgttctactcagtgtatcccagagtcctggagatgcgatggtgaaaatgattgt
gacaatggagaagatgaagaaaactgtggcaacattacatgtagcgcggatgagttcact
tgctccagtggccgctgtgtctccaggaactttgtgtgcaatggacaggatgactgtgac
gatggcagtgatgagctggactgtgctccaccgacctgcggtgcccacgagttccagtgc
agcacctcctcctgcatcccgctcagctgggtgtgtgacgatgacgcagactgttccgac
caatcagacgagtctcttgagcagtgtggccgtcagcctgtgatacacaccaaatgtccc
accagtgagatccagtgtggctctggcgagtgcattcacaaaaaatggcggtgtgacgga
gacccggactgcaaggacggcagcgacgaggtcaactgtccttctcgaacctgcagacct
gaccagtttgaatgtgaggacggtagctgtatccatggcagcagacaatgcaacggcatc
cgagactgtgttgacggctctgatgaagtcaactgcaaaaacgtcaatcagtgcctgggc
cctggaaagtttaagtgcagaagtggggaatgcatagacatcaccaaagtatgtgaccag
gaacaggactgcagagactggagcgacgagcccctgaaggagtgccatatcaacgaatgc
ttggtcaataacggtggctgttcccatatctgcaaagacctagttataggttatgaatgt
gactgtgcagctgggtttgaactgatagacaggaaaacctgtggagatattgatgaatgc
caaaatccggggatctgcagtcaaatttgtatcaacttaaaaggcggttacaaatgtgaa
tgtagtcgtggctatcaaatggatcttgccactggcgtgtgcaaggcagtaggcaaagag
ccaagtctgatcttcactaatcggagagacatcaggaagattggactagagaggaaggaa
tacatccaacttgtagaacaactaagaaacacggtggctctcgatgctgacattgcagct
cagaagctattttgggctgatctaagccaaaaggccatcttcagtgcctcaattgatgac
aaggttggtagacattttaaaatgatcgacaatgtctataatcctgcagccattgctgtt
gattgggtgtacaagaccatctactggactgatgcggcttctaagactatttcagtagct
actctagacggaaccaagaggaagttcctgtttaactctgatttgcgagagcctgcctcc
atagctgtggatccgttgtctggctttgtttactggtcagactggggtgagccagctaaa
atagaaaaagcaggaatgaatggatttgatagacgtccactggtgacagaggacatccaa
tggcctaatggaattaccctcgaccttgtcaaaagccgcctctactggctggattccaag
ttgcacatgctctctagtgtggacctgaatggtcaagatcgtaggatagtgctcaagtct
ctggagttcctagctcatcctcttgcactcaccatatttgaggatcgtgtctactggata
gatggagaaaatgaagcagtgtatggtgccaataaattcactgggtcagagctggccact
ctagtgaacaatctcaatgatgcccaagacatcattatctaccatgaactcgtccagcct
tcaggtaaaaactggtgtgaggaagatatggagaatggaggatgtgaatatctctgcctg
ccagcaccacagatcaatgatcactctccaaaatatacctgttcctgtcccaatgggtac
aatcttgaagaaaatggacgcgagtgtcaaagtacttcaactcctgtgacttacagtgag
acaaaagatgtcaacacaacagacatcctacgaactagtggacttgttcctggagggatc
aatgtgaccacagcagtatcagaagtcagtgttcccccaaaagggacttcagctgcctgg
gccatccttcctctcttgctcttagtgatggcagcagtaggtggctacttgatgtggagg
aattggcaacataaaaacatgaaaagcatgaactttgacaatcccgtgtacttgaagacc
actgaagaggacctctcaatagacattggtagacatagcgcttctgtaggacacacatac
ccagcaatctcagttgtaagcacagatgatgatttggcttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (10)   
   UniProt (1)   
   RefSeq(pep) (9)   
DNA sequence (11)   
   RefSeq(nuc) (9)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (40)   

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