KEGG   Rattus norvegicus (rat): 25720
Entry
25720             CDS       T01003                                 
Symbol
Tcf12
Name
(RefSeq) transcription factor 12
  KO
K15603  transcription factor 4/12
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    25720 (Tcf12)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Ubiquitous (class A) factors
    25720 (Tcf12)
SSDB
Motif
Pfam: HLH
Other DBs
NCBI-GeneID: 25720
NCBI-ProteinID: NP_037308
RGD: 3829
Ensembl: ENSRNOG00000057754
UniProt: P51514
Position
8:complement(81371201..81682337)
AA seq 707 aa
MNPQQQRMAAIGTDKELSDLLDFSAMFSPPVNSGKTRPTTLGSSQFSGSGMDERGGTTSW
GTSGQPSPSYDSSRGFTDSPHYSDHLNDSRLGTHEGLSPTPFMNSNLIGKTSERGSFSLY
SRDSGLSGCQSSLLRQDLGLGSPAQLSSSGKPGTPYYSFSATSSRRRPLHDSVALDPLQA
KKVRKVPPGLPSSVYAPSPNSDDFNRESPSYPSPKPPTSMFASTFFMQDGTHSSSDLWSS
SNGMSQPGFGGILGTSTSHMSQSSSYGSLHSHDRLSYPPHSVSPTDINTSLPPMSSFHRG
STSSSPYVAASHTPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSNP
STPVGSPSPLTAGTSQWPRAGGQAPSSPSYENSLHSLKNRVEQQLHEHLQDAMSFLKDVC
EQSRMEDRLDRLDDAIHVLRNHAVGPSTSLPTSHSDIHSLLGPSHNAPIGNLNSNYGGSS
LVTNSRSASMVGTHREDSVSLNGNHSVLSSTVAASNTELNHKTPESFRGGVQNQSGSVVP
TEIKTENKEKDENLHEPPSSDDMKSDDESSQKDIKVSSRGRTSSTNEDEDLNPEQKIERE
KERRMANNARERLRVRDINEAFKELGRMCQLHLKSEKPQTKLLILHQAVAVILSLEQQVR
ERNLNPKAACLKRREEEKVSAASAEPPTTLPGTHPGLSETTNPMGHL
NT seq 2124 nt   +upstreamnt  +downstreamnt
atgaatccccagcagcagcgcatggccgcgatagggaccgacaaggagctgagcgacctg
ctggacttcagtgcgatgttttctccacctgttaatagtgggaaaacgagaccaacgaca
ctgggaagtagtcagttcagcgggtcaggtatggatgagcgtggaggaacaacgtcttgg
ggaacaagcggtcaaccaagcccctcctatgattcatctagaggttttacagacagccct
cattacagtgatcacttgaatgacagtcgattaggaacccatgaaggcttgtccccaaca
cctttcatgaactcaaatctgatagggaaaacctcagagagaggctcattttccctgtac
agcagagactctggattatcaggctgtcagtctagtctcctgagacaagatctaggactc
gggagcccagcacagttgtcttcttcaggaaaacctggaacaccatactactcattctct
gccacaagttctagaagaagaccgctccatgattctgtagctctagatcctttacaagca
aagaaagtaagaaaggtgcctcctggcctaccttcttctgtgtatgcaccatccccaaat
tctgacgatttcaaccgtgaatctcctagttacccatctcccaagccaccaaccagtatg
ttcgctagcactttctttatgcaagatggcactcacagttcttctgacctttggagttca
tcgaatgggatgagccagcctggttttggtggaattctggggacctccacttcccacatg
tctcagtccagtagttatggcagtcttcattcacatgaccgcttgagttatcctccacac
tcagtgtcaccaacagacataaacacaagtcttccgccaatgtccagcttccaccgtggt
agtaccagcagctcaccatatgttgccgcctcacatactcctcccatcaatggatcagat
agcatcctgggaacccgagggaatgctgctggaagctcacagaccggtgatgcacttggg
aaggccttggcatctatttattctcctgaccacacaagcagtagttttccatcaaaccca
tcaacaccagtaggatctccttcacctctcacagcaggtaccagtcagtggcccagagct
ggagggcaagctccttcatccccaagctatgaaaactcacttcactccctgaaaaatcga
gttgagcagcaacttcacgagcatttgcaagatgcaatgtccttcttaaaggatgtctgt
gagcagtctcgaatggaagaccgtttagacaggctggatgatgctatccatgtgctacgg
aaccatgcagttggaccttctaccagtctgcctactagccacagtgatatacacagttta
ttgggaccatcccataatgcaccaattggaaacctcaattcaaactatggaggatcaagc
cttgttacaaatagtcgatcagcttcgatggtcggaactcatcgggaagattcggtcagt
ctcaatggcaatcattcggtcctgtctagtactgttgctgcctcaaacacagaactgaac
cataaaacaccagaaagtttcagaggtggtgtacaaaatcagtctggaagtgttgttcca
acagaaatcaagactgaaaacaaagaaaaagatgaaaaccttcatgaacctccttcatca
gatgacatgaaatcagatgatgagtcctcccagaaagacatcaaagtctcatctagaggc
agaacaagcagtaccaatgaagatgaggatctgaatccagaacagaaaatcgaaagggag
aaggaaaggcggatggctaacaatgccagagagcgcttgcgtgtgcgggatatcaatgag
gcattcaaggagctcggccgaatgtgtcagcttcatttgaagagtgagaaaccacagaca
aaacttctcattcttcatcaagccgtggcagtcatccttagtctagaacagcaagtcaga
gagaggaacctcaaccccaaagcagcctgccttaagagaagagaagaagaaaaggtctct
gctgcgtcagcagagccgcccaccacgttgccaggaacccatcctgggcttagtgagaca
accaaccctatgggtcatctgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (25)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (23)   
DNA sequence (31)   
   RefSeq(nuc) (23)   
   GenBank (4)   
   EMBL (4)   
Protein domain (1)   
   Pfam (1)   
All databases (66)   

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