KEGG   Rattus norvegicus (rat): 259241
Entry
259241            CDS       T01003                                 
Symbol
Nr1d2
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2
  KO
K08531  nuclear receptor subfamily 1 group D member 2
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04710  Circadian rhythm
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    259241 (Nr1d2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    259241 (Nr1d2)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:rno03310]
    259241 (Nr1d2)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    259241 (Nr1d2)
Nuclear receptors [BR:rno03310]
 1. Thyroid hormone like
  1D. Rev-Erb
   259241 (Nr1d2)
SSDB
Motif
Pfam: zf-C4 Hormone_recep LpxD
Other DBs
NCBI-GeneID: 259241
NCBI-ProteinID: NP_671743
RGD: 628828
Ensembl: ENSRNOG00000046912
UniProt: Q63504 A6K037
Position
15:9955034..9981329
AA seq 578 aa
MELNAGGVIAYISSSSSASSPASCHSEGSENSFQSSSSSVPSSPNSSNCDANGNPKNTDV
SSIDGVLKSDRTDCPVKTGKPGAPGMTKSHSGMTKFSGMVLLCKVCGDVASGFHYGVHAC
EGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFKKCLSVGMSRDAVRFGRIP
KREKQRMLIEMQSAMKTMMSTQFGGHLQSDTLAEPHEQSVPPAQEQLRPKPQLEQENIKS
TPPPSDFAKEEVIGMVTRAHKDTFLYNQEHRENSSESMPPHRGERIPRNVEQYNLNHDHR
GGGLHSHFPCSESQQHLSGQYKGRNMMHYPNGHTVCISNGHCVNFSSAYPQRVCDRIPVG
GCSQTESRNSYLCSTGGRMHLVCPMSKSPYVDPQKSGHEIWEEFSMSFTPAVKEVVEFAK
RIPGFRDLSQHDQVNLLKAGTFEVLMVRFASLFDAKERTVTFLSGKKYSVDDLHSMGAGD
LLSSMFEFSEKLNGLQLSDEEMSLFTAVVLVSADRSGIENVNSVEALQETLIRALRTLIM
KNHPNEASIFTKLLLKLPDLRSLNNMHSEELLAFKVHP
NT seq 1737 nt   +upstreamnt  +downstreamnt
atggaactgaacgcgggaggtgtgattgcctacatcagttcctccagctctgcctccagc
cctgcctcctgtcacagcgagggctctgagaacagtttccagtcctcgtcctcgtccgtt
ccgtcttctccaaacagctccaactgtgatgccaacggcaaccccaagaacacggatgtc
tctagcattgacggtgttctcaagagcgaccgcacagactgtcctgtgaaaacaggcaaa
cctggtgcccctggcatgaccaagagtcacagcggaatgacaaaatttagtggcatggtt
ctgctatgtaaagtctgtggggatgtggcctcaggattccactatggagttcatgcttgt
gaaggctgtaagggcttcttcaggaggagcattcagcagaacatccagtacaagaagtgc
ctgaagaacgagaattgctccatcatgaggatgaacaggaaccgctgccagcagtgccgc
ttcaagaagtgtctgtccgtgggaatgtcgcgggacgctgttcgatttggccggattccc
aagcgtgaaaaacagagaatgctaattgagatgcaaagtgcaatgaagaccatgatgagc
acccagttcggtggccacctgcagagtgacaccttagcagagccgcatgagcagtcagta
ccaccggctcaggagcagctgcggcccaagccccagctggagcaagaaaacatcaaaagc
acccctcctccttctgattttgcaaaggaggaagtgattggcatggtgaccagagcccac
aaggatacctttctgtataatcaggaacatcgagaaaactcatctgagagcatgccaccc
catagaggagaacggattcccaggaatgtggagcaatataatttaaatcatgaccatcgt
ggcggtgggcttcacagccacttcccctgtagtgagagccagcagcatctcagtggacag
tacaaagggaggaacatgatgcactacccaaacgggcataccgtttgtatttcgaatgga
cactgtgtgaacttctccagtgcttaccctcaaagagtctgtgataggattccagtaggt
ggatgttctcagactgagagcaggaatagctacctgtgcagcactggagggaggatgcat
ctggtttgtcctatgagcaagtctccatatgtggatcctcagaaatctggacatgaaatc
tgggaagaattttcaatgagttttaccccagcagtaaaagaggtggtagaatttgcaaaa
cgtattcctggcttccgagatctgtctcagcatgatcaggtcaacctgttaaaagctggg
acttttgaggttttaatggtgcgatttgcttcgttatttgatgcaaaggagcggactgtc
accttcctgagtggtaagaagtacagtgtggatgacctgcactccatgggagcaggcgat
ctgctcagctctatgtttgagttcagcgagaagctgaatggcctccagctcagcgacgag
gaaatgagcttgttcacagctgttgttctggtgtctgcagatcgatctggaattgaaaat
gtcaactcagtggaggctctgcaggaaacactcatccgtgcactaaggaccttaataatg
aaaaaccatccaaatgaggcctccatttttacaaaattacttctaaagttgccagatctt
cgatctttaaacaacatgcactctgaggaactcttggcctttaaagttcatccttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (9)   
   RefSeq(nuc) (1)   
   GenBank (4)   
   EMBL (4)   
Protein domain (3)   
   Pfam (3)   
All databases (27)   

Download RDF
DBGET integrated database retrieval system