KEGG   Rattus norvegicus (rat): 260323
Entry
260323            CDS       T01003                                 
Symbol
Snx27
Name
(RefSeq) sorting nexin-27 isoform a
  KO
K17936  sorting nexin-27
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    260323 (Snx27)
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:rno04990]
    260323 (Snx27)
Membrane trafficking [BR:rno04131]
 Protein recycling
  Others
   Others
    260323 (Snx27)
Domain-containing proteins not elsewhere classified [BR:rno04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   260323 (Snx27)
SSDB
Motif
Pfam: PX PDZ RA PDZ_6 SNX17-27-31_F1_FERM PDZ_2 USP7_C2 SNX17_FERM_C UBX SNX17-31_F2_FERM RBD DarA_N Ras_bdg_2
Other DBs
NCBI-GeneID: 260323
NCBI-ProteinID: NP_001103621
RGD: 628705
Ensembl: ENSRNOG00000020893
UniProt: Q8K4V4 A6K2S0
Structure
Position
2:complement(184824930..184907931)
AA seq 539 aa
MADEDGEGIHPSAPHRNGGGGGGSGLHCAGNGGGGGGGPRVVRIVKSESGYGFNVRGQVS
EGGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQVVDLIR
AGEKELILTVLSVPPHEADNLDPSDDSLGQSFYDYTEKQAVPISVPTYKHVEQNGEKFVV
YNVYMAGRQLCSKRYREFAILHQNLKREFANFTFPRLPGKWPFSLSEQQLDARRRGLEEY
LEKVCSIRVIGESDIMQEFLSESDENYNGVSDVELRVALPDGATVTVRVKKNSTTDQVYQ
AIAAKVGMDSTTVNYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLTIRKWLF
TTEEEVLLNDNDLAVTYFFHQAVDDVKKGYIKAEEKSYQLQKLYEQRKMVMYLNMLRTCE
GYNEIIFPHCACDSRRKGHVITAISITHFKLHACTEEGQLENQVIAFEWDEMQRWDTDEE
GMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKENIFQMARSQQRDVAT
NT seq 1620 nt   +upstreamnt  +downstreamnt
atggcggacgaggacggggaagggattcacccctcagccccgcaccggaatggaggcggc
ggcggggggtctgggctccactgcgccgggaacggtggcgggggaggcggcggcccgcgg
gtcgtgcgcattgtcaagtccgaatccggctacggcttcaacgtgcggggccaagtgagc
gagggcgggcaactgcggagcatcaacggggagctgtacgcgccgctgcagcatgtgagc
gccgtgctgcccgggggggcggccgaccgggccggggtgcgcaagggggaccgcatcctg
gaggtgaacggcgtgaatgttgagggggcgacacacaagcaggtggtggacctgatccga
gcaggcgagaaggaattgatcttgacagtgttgtctgtacctcctcatgaggctgataac
ctagaccccagtgacgactccttgggacaatcattttatgattacacagaaaagcaagca
gtgcccatatcggtccccacatacaaacatgtggagcagaatggtgagaaatttgtggta
tacaatgtttatatggccgggaggcagctgtgttctaagcggtaccgggagtttgccatt
ctgcaccaaaacctgaagagagagtttgccaactttacatttcctcgacttccaggaaag
tggccattctcattatcagagcaacagttagatgcccggcgtcgggggttggaagaatat
ctagaaaaggtgtgctccatccgagtcattggtgagagcgacatcatgcaggagttcctg
tcagaatctgatgagaattacaatggtgtgtctgatgtggagctgagagtagcattacca
gatggagcaactgttactgtcagagttaaaaagaacagcaccacagaccaagtgtaccag
gctattgcagcaaaggttggcatggacagtacaacagtgaactactttgccttatttgaa
gtcatcaatcattcctttgtacgtaagctggcccctaatgaatttcctcataaactgtac
gtccagaattacacatcagctgtgccaggcacctgcctgaccattcgcaagtggctcttt
accacagaagaagaagtcctcttaaatgacaatgaccttgctgtcacgtacttctttcat
caggctgttgatgatgtaaagaaaggttacattaaagcggaggagaagtcttaccagtta
cagaagctgtatgaacaaaggaagatggtcatgtacctcaacatgctaaggacctgtgag
ggctacaatgaaatcatcttccctcactgtgcctgcgactccaggaggaaggggcatgtt
atcacagccatcagcatcacgcactttaaacttcatgcctgcactgaagaagggcagctg
gagaaccaggtaatagcgtttgaatgggatgagatgcagcgatgggacacagacgaagaa
ggaatggccttctgttttgaatatgcacgaggagagaagaagcctcgatgggttaaaatc
ttcacaccatatttcaattacatgcatgagtgctttgagagggtgttctgcgagctcaag
tggagaaaagagaatattttccagatggcgaggtcacaacagagggatgtggccacctag

DBGET integrated database retrieval system