KEGG   Rattus norvegicus (rat): 266713
Entry
266713            CDS       T01003                                 
Symbol
Mnat1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03022  Basal transcription factors
rno03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    266713 (Mnat1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    266713 (Mnat1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rno03021]
    266713 (Mnat1)
   03400 DNA repair and recombination proteins [BR:rno03400]
    266713 (Mnat1)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     266713 (Mnat1)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     266713 (Mnat1)
SSDB
Motif
Pfam: MAT1 zf-C3HC4_5 zf-RING_5 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_2 zf-UDP TRAF3_RING DZR_2 DNA_ligase_ZBD LMBR1 zinc-ribbons_6 zf-P11 zf-RING_4 DUF1272 Poty_PP
Other DBs
NCBI-GeneID: 266713
NCBI-ProteinID: NP_703202
RGD: 628874
Ensembl: ENSRNOG00000007267
UniProt: A6HC54 Q6AZ68
Position
6:97550566..97706598
AA seq 309 aa
MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSNFRV
QLFEDPTVDKEVEIRKKVLKIYNKREEDFPSLREYNDFLEEVEEIVFNLTNNVDLENTKK
KMEIYQKENKDVIQKNKLKLTREQEELEEALEVERQESEQRRLFIQKEEELQQILKRKNK
QAFLDELESSDLPVALLLAQHKDRSTQLEMQLEKPKSMKPVTFSTGIKMGQQISLAPIQK
LEEALYEYQPLQIETCGPQVPEQELLGRLGYLNHVRAASPQDLAGGYTSSLACHRALQDA
FSGLFWQPR
NT seq 930 nt   +upstreamnt  +downstreamnt
atggacgaccagggctgccccaggtgtaagaccaccaaataccggaacccttctttgaag
ctgatggtgaacgtgtgcggacacacactgtgtgagagttgtgtggacttactgtttgta
agaggagctggaaactgtccggagtgtggcactccactgagaaagagcaactttagggta
cagctctttgaagatcccactgttgacaaggaggttgaaattcggaaaaaagtactaaag
atatacaataaaagggaagaagattttcctagtttaagagagtataatgattttctggaa
gaagtggaggaaatcgttttcaatttgaccaacaacgtggatttggagaacactaaaaag
aaaatggaaatatatcaaaaagaaaacaaagatgtcattcagaaaaataaattaaagctg
actcgggagcaggaggaattggaggaagcattggaggtagaacgccaagaaagtgaacaa
cgacgactgtttattcaaaaggaagaagagctgcagcagattctgaaaaggaagaacaag
caggcctttttagatgagctggagagctccgacctccctgtcgctctgctcttggctcag
cataaagacagatctacccagctggaaatgcagcttgagaagcccaaatccatgaagccg
gtgacattttccacaggaattaaaatgggtcaacagatttcgttagcaccaatccaaaag
cttgaggaagctctctatgaataccagcccctgcagatagagacctgtggaccccaagtt
cctgaacaagagctgctaggaagacttgggtatttgaaccacgtccgagctgcatctcca
caggatctagctggcggctatacttcttctcttgcttgtcacagagcgctacaggatgca
ttcagtgggcttttctggcagcccagatag

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