KEGG   Rattus norvegicus (rat): 27080
Entry
27080             CDS       T01003                                 
Symbol
Hbp1
Name
(RefSeq) HMG box-containing protein 1
  KO
K21644  HMG box transcription factor 1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    27080 (Hbp1)
Transcription factors [BR:rno03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    27080 (Hbp1)
SSDB
Motif
Pfam: AXH HMG_box HMG_box_2 MATalpha_HMGbox
Other DBs
NCBI-GeneID: 27080
NCBI-ProteinID: NP_037353
RGD: 620444
Ensembl: ENSRNOG00000008927
UniProt: Q62661 Z4YNI2 A6HB56
Position
6:complement(54257118..54283373)
AA seq 523 aa
MATGLSEHHNMVWEVKTNQRPHAVQRLLLVMDERATGVSDSLELLQCNENVPSSPGYNSC
DEHMELDDLPELQAVQSDPTQSAIYQLSSDVSHQEYPRPSWSQNTSDIPENTHREDEVDW
LTELANIATSPQSPLMQCSFYNRSSPVHIIATSKSLHSYARPPPVSSAKSGPAFPHDHWK
EETPVRHERANSESESGIFCMSSLSDDDDLGWCNSWPSTVWHCFLKGTRLCFHKESKKEW
QDVEDFARAASCDEEEIQMGTHKGYGSDGLKLLSHEESVSFGESVLKLTFDPGTVEDGLL
TVECKLDHPFYVKNKGWSSFYPSLTVVQHGIPCCEIHIGDVCLPPGHPDAINFDDSGVFD
TFKSYDFTPMDSSAVYVLSSMARQRRASLSCGGPGTGQEFAGSEFSKSCGSPGSSQLSSS
SLYTKAVKSHSSGTVSATSPNKCKRPMNAFMLFAKKYRVEYTQMYPGKDNRAISVILGDR
WKKMKNEERRMYTLEAKALAEEQKRLNPDCWKRKRTNSGSQQH
NT seq 1572 nt   +upstreamnt  +downstreamnt
atggcgacgggtttgtcggagcaccataatatggtgtgggaagtgaagacgaaccagagg
cctcatgcagtacagagactcctgctggtgatggacgagagagctacaggagtgagtgac
tcattggagttgctgcagtgtaatgagaatgtgccgtcctctccaggatacaactcctgt
gatgagcacatggagcttgatgaccttcctgaacttcaggctgttcaaagtgaccctacc
caatctgccatataccagctcagttcagatgtatctcatcaagaatatccaagaccatct
tggagccagaatacctcagacataccggaaaatactcaccgtgaagatgaggtggactgg
ctaacagagttagcaaatattgccactagtccacaaagtccactaatgcagtgctcattt
tataacagatcatctcctgtacacatcatagctactagcaaaagtttacattcctatgca
cgcccaccaccagtgtcctctgcaaagagcggaccagccttccctcatgaccactggaag
gaagaaacaccagtaagacatgaaagggcaaacagtgagtcagagtcaggaattttctgc
atgtcctccctgtcagatgatgatgatctgggctggtgcaattcctggccatcaaccgtt
tggcattgctttctcaaaggcacacgactgtgcttccataaggaaagcaaaaaggagtgg
caagatgttgaagactttgctagagccgccagctgtgatgaggaggagatccaaatgggc
actcacaagggctatgggtctgatggtctaaagttgttatcccatgaagagagtgtgtca
ttcggtgagtctgtactgaagttgacatttgatcctggtacagtagaagatggcttgctt
actgtggagtgcaagctggaccaccctttctatgttaaaaataaaggctggtcatcattt
tatccaagcttgactgtggtacagcacggcattccatgctgtgagattcatattggtgac
gtatgtctacctcctggacaccctgatgccattaatttcgatgattcaggtgtttttgat
acatttaaaagctatgacttcacacctatggactcttccgcagtctacgttttgagtagt
atggctcgccagcgccgcgcatctttgtcttgtggaggacctggtactggtcaagagttt
gcaggatctgaattcagtaaaagctgtggttcaccaggatcatcacagctctcctctagt
tctttatacactaaagctgtcaaaagccacagctcagggactgtgagtgccacttctcct
aataagtgcaaaagaccaatgaatgccttcatgctttttgccaaaaaatacagagttgaa
tatactcagatgtatccagggaaagataacagagccataagtgtgatccttggtgacagg
tggaaaaaaatgaagaacgaggaaaggaggatgtatacattagaagcaaaggctttggct
gaagaacaaaagcgtttaaatcccgactgctggaaaaggaaaagaaccaattcaggctct
caacagcactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (3)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (14)   
   RefSeq(nuc) (2)   
   GenBank (6)   
   EMBL (6)   
Protein domain (4)   
   Pfam (4)   
All databases (33)   

Download RDF
DBGET integrated database retrieval system