KEGG   Rattus norvegicus (rat): 27256
Entry
27256             CDS       T01003                                 
Symbol
Cntn6
Name
(RefSeq) contactin-6 precursor
  KO
K06764  contactin 6
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:rno04515]
    27256 (Cntn6)
Cell adhesion molecules [BR:rno04515]
 Immunoglobulin superfamily
  Contactins
   27256 (Cntn6)
SSDB
Motif
Pfam: Ig_3 I-set ig Ig_2 fn3 V-set Ig_5 C2-set_2 Ig_4 Sp38 Pur_ac_phosph_N V-set_CD47 Tissue_fac
Other DBs
NCBI-GeneID: 27256
NCBI-ProteinID: NP_037357
RGD: 62008
Ensembl: ENSRNOG00000032517
UniProt: P97528
Position
4:138911090..139307339
AA seq 1028 aa
MRLLWKLVILLPLINSCAGESRFTRPIFIQEPQDVIFPLDLSRSEIILSCTASGYPSPHY
RWKQNGTDIDFSMTYHYRLDGGSLAISSPRTDQDIGIYQCLATNPVGTILSRKAKLQFAY
IEDFETKSRSTVSVREGQGVVLLCGPPPHFGELSYDWTFNDNPLYVQEDKRRFVSQNTGN
LYIAKVEPSDVGNYTCFVTNKEAHRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAA
KDSSVKLECFALGNPVPDISWRRLDGSPMPGKVKYSNSQATLEIPKFQQEDEGFYECVAG
NLRGRNLAKGQLIFYAPPEWEQKIQNTYLSIYDSLFWECKASGNPNPSYTWLKNGERLNT
EERIQTENGTLIITMLNVSDSGIYQCAAENKYQTIYANAELRVLASAPDFSKNPIKKISV
VQVGGDISIECKPNAFPKASISWKRGTENLKQSKRVFFLEDGSLKICNVTRSDAGSYTCV
ATNQFGNGKSSGSLIVKERTVITVPPSKMDVTVGESIVLPCQVSHDPTMEVLFVWYFNGD
VIDLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLERLSAVADIIVRGPPGP
PEDVKVEHISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVGWQAVATVPEILNGQTYNA
TVIGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASIPNVAPVNINGGGGSRSELVIT
WEPIPEELQNGEGFGYIIMFRPVGSTTWMKEKVALVESSKFIYRNESIMPLSPFEVKVGV
YNNEGEGSLSTVSIVYSGEDEPRLAPRGTSVQSFSASDMEVSWNAIAWNRNTGRVLGYEV
LYWTDNSKESMIGKIRVSGNVTTKNITGLRANTIYFASVRAYNTAGTGPSSPPVNVTTKK
SPPSQPPANIAWKLSNSKLCLNWEHVKTMENESEVLGYKILYRQNRQSKTHVLETNNTSA
ELLVPFEEDYLIEIRTVSDGGDGSSSEEIRIPKMSSLSSVGVQILKPSTQFLTMVGFFYC
FVIQPLSR
NT seq 3087 nt   +upstreamnt  +downstreamnt
atgaggttgctatggaaactggtaattctgctgccactcataaactcttgtgcaggtgag
agtcgttttactcgtcctatttttatccaggagccacaggatgtcatttttccgttggat
ttatctagatctgaaattattctgagttgtactgcaagtggatacccttctccccactac
aggtggaaacagaatggtacagacattgacttcagcatgacttatcactataggttggat
ggaggcagtttggccatcagcagccccagaacagatcaagatattggcatataccagtgt
ctggccaccaatccggtgggcaccattctgagtagaaaagccaaactacagtttgcatat
attgaagactttgaaaccaaatccagaagcacggtctctgtccgggaaggtcaaggagtg
gtactcctctgtggcccaccaccacattttggagaattatcatatgattggaccttcaat
gataaccctttgtatgttcaagaggacaagcgacgatttgtatctcaaaacacagggaac
ttgtacattgccaaagtagaaccgtctgatgtgggcaattatacttgctttgtcacaaac
aaagaggcccacagaagtgtccaaggaccacctactcctttagtgcagcgcactgatggt
gtcatgggggaatatgagccaaagattgaagtgcgttttcctgaaacaatacaagctgca
aaggattcatctgtaaaactggaatgctttgcccttggaaatccagtccctgatattagt
tggaggcggttggatggaagcccgatgccagggaaagtcaagtacagcaactcccaagct
acccttgaaatccccaagtttcaacaagaggatgaaggcttctatgagtgcgttgcaggt
aaccttcgaggaagaaaccttgcaaagggtcaactcattttctatgctcctccagaatgg
gaacagaaaatccaaaatacatacctttctatctatgacagcttgttttgggaatgcaaa
gctagtggaaacccaaatccttcgtacacgtggctaaagaatggtgaacgtctcaacaca
gaagagagaattcagactgaaaatgggactcttatcatcaccatgctgaacgtgtcagac
tctgggatctaccagtgtgctgcagaaaacaagtatcagacaatttatgcaaatgcagaa
ttgagagttttagcctcagctccagatttctcaaaaaatcccattaaaaaaatttcagtt
gttcaagttggtggtgacatttcaatcgaatgcaaaccaaacgctttccccaaagcatct
atttcctggaaaagaggaacggagaacctgaagcaaagtaaaagagtttttttcttggag
gatggtagccttaagatatgcaatgttaccagatcagatgctggatcttatacttgcgta
gccacaaatcaatttggcaatgggaaaagcagtggtagtctcatcgtaaaagagcgaacg
gtcattacagtaccaccgtctaaaatggatgttacagttggagagagcattgtcttaccc
tgccaggtgtctcatgatcccaccatggaagttctctttgtttggtacttcaatggagat
gtcatagatttaaagaaaggagtggctcattttgaacgaattgggggtgaatctgttggg
gatttgatgataaggaatattcaattaggccattcgggaaaatatctatgcacagtacaa
acaacactagaacgcttgtctgctgtcgctgatatcattgtgagaggtcctcctggtccc
ccagaagatgtaaaagtggagcacatctctagtaccacgtcccagctcagctggagacct
ggtcctgataataacagccccattcaaatttttaccattcagactcggacacccttctct
gtgggctggcaagctgttgccacagtccctgaaattctcaatggacagacatacaatgca
acagtcattggtttgagtccttgggtggaatatgaatttcgtgttgttgctgggaacaac
attggaattggagagccaagcaaaccatcagagttgctgagaaccaaagcatcaatcccc
aatgtggcaccagtaaatatcaatggaggtggtgggagcagatcggaacttgtcattacg
tgggagcctattccagaagaactacagaatggagaggggtttggatatatcatcatgttc
cggccagtgggctcaacaacctggatgaaagaaaaggtggctcttgtagaatcttcaaag
ttcatctacagaaatgaaagcatcatgcctttgtctccctttgaagtcaaagtgggagtg
tacaacaatgaaggcgaaggttccctgagtaccgtgtctattgtctactctggggaagat
gaacctcggctggctccaagaggaacttctgtccagagtttttctgcttctgacatggag
gtttcctggaatgccattgcttggaatagaaacactggaagagtgctgggctatgaggtc
ttatactggactgacaactccaaagaatctatgattgggaaaattagagtcagtggaaat
gtcacaaccaagaatattacagggctaagagctaatacgatttactttgcttctgtgaga
gcctacaacactgcagggacaggaccctcaagtccaccagttaatgtcaccacgaaaaag
tccccacctagccaaccaccagcaaacattgcctggaagctgtcaaattccaaattatgc
ctgaactgggagcatgtaaaaactatggaaaatgagtctgaagtgctgggctacaagatc
ctctatcggcagaaccgacagagtaaaactcatgtcttggaaacaaataatacatcagct
gagctactggttccatttgaagaagactatttgatcgaaatcagaacagtcagtgatggt
ggagacggaagcagtagtgaggaaatcagaattccaaaaatgtcaagtttgagttccgtg
ggagttcagatcttgaagcccagtacccagttcctgacaatggttggatttttttactgt
tttgttattcagccactttcacgatga

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