KEGG   Rattus norvegicus (rat): 282822
Entry
282822            CDS       T01003                                 
Symbol
Trpc7
Name
(RefSeq) short transient receptor potential channel 7
  KO
K04970  transient receptor potential cation channel subfamily C member 7
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:rno04040]
    282822 (Trpc7)
Ion channels [BR:rno04040]
 Voltage-gated cation channels
  Transient receptor potential channel (TRP)
   282822 (Trpc7)
SSDB
Motif
Pfam: TRP_2 Ion_trans PKD_channel Ank_2 Ank Ank_4 DUF6569
Other DBs
NCBI-GeneID: 282822
NCBI-ProteinID: NP_001178620
RGD: 628820
Ensembl: ENSRNOG00000012727
UniProt: A6KAM1 F1LQF7
Position
17:7707954..7839064
AA seq 862 aa
MLGSNTFKNMQRRHTTLREKGRRQAIRGPAYMFNEKGTSLTPEEERFLDSAEYGNIPVVR
KMLEESKTLNFNCVDYMGQNALQLAVGNEHLEVTELLLKKENLARVGDALLLAISKGYVR
IVEAILSHPAFAQGQRLTLSPLEQELRDDDFYAYDEDGTRFSHDITPIILAAHCQEYEIV
HILLLKGARIERPHDYFCKCNECTEKQRKDSFSHSRSRMNAYKGLASAAYLSLSSEDPVL
TALELSNELARLANIETEFKNDYRKLSMQCKDFVVGVLDLCRDTEEVEAILNGDVNLQVW
SDHHRPSLSRIKLAIKYEVKKFVAHPNCQQQLLTMWYENLSGLRQQSIAVKFLAVFGVSI
GLPFLAIAYWIAPCSKLGRTLRSPFMKFVAHAVSFTIFLGLLVVNASDRFEGVKTLPNET
FTDYPKQIFRVKTTQFSWTEMLIMKWVLGMIWSECKEIWEEGPREYVLHLWNLLDFGMLS
VFVASFTARFMAFLKASEAQLYVDQYVQDVTLHNVSLPPEVAYFTYARDKWWPSDPQIIS
EGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMIGMFNL
YSYYRGAKYNPAFTTVEESFKTLFWSIFGLSEVISVVLKYDHKFIENIGYVLYGVYNVTM
VVVLLNMLIAMINNSYQEIEEDADVEWKFARAKLWLSYFDEGRTLPAPFNLVPSPKSFYY
LIMRIKMCLIKLCKSKAKRCENDLEMGMLNSKFRKTRYQAGMRNSENLTANSTFSKPTRY
QKIMKRLIKRYVLKAQVDRENDEVNEGELKEIKQDISSLRYELLEEKSQATGELADLIQQ
LSEKFGKNLNKDHLRVNKGKDI
NT seq 2589 nt   +upstreamnt  +downstreamnt
atgttggggagcaacaccttcaaaaacatgcagcgccggcacaccaccttgagggagaag
gggcgccgccaggccatccggggtcctgcctacatgttcaatgagaagggcaccagcctg
acccctgaggaggagcgcttcctggactcggctgagtatggcaacataccagtggtcagg
aaaatgttggaggagtccaagaccctcaatttcaactgcgtggactacatggggcagaac
gcgctgcagctagctgtgggcaacgagcacctagaggtcactgaactgctgctgaagaag
gagaacttggctcgagtgggcgacgcgctgctgctggccatcagcaagggctacgtgcgc
attgtggaggccatcctcagccatccggccttcgcacagggccagcggctgacgctcagc
ccgctggagcaggagctgcgcgatgacgacttctatgcctacgacgaggatggcacgcgc
ttctcccacgacatcacacccatcatcctggcggcccactgccaggagtacgagattgta
cacatcctgctgctcaagggtgcgcgcattgagcggccccatgactacttctgcaagtgc
aatgagtgcaccgagaagcagcgcaaggactccttcagccattcgcgctcccgtatgaat
gcctacaaaggactggccagtgccgcctacctgtccctatccagtgaagaccctgtcctc
actgcactggagctaagcaacgagttagccagactggccaacattgagactgaatttaag
aacgactacaggaagttatctatgcaatgcaaggactttgtggtgggcgtgctggacctg
tgccgagacacggaagaggtggaagcaattttaaatggcgacgtgaacttgcaagtctgg
tccgaccaccaccgtccaagtctgagccgcatcaaacttgccattaagtacgaagtcaag
aagttcgttgcccaccctaactgtcagcagcaattgcttaccatgtggtatgaaaatctc
tcaggcttacggcaacagtctatcgctgtgaaattcctggctgtctttggagtctccata
ggcctcccttttctcgccatagcctattggattgctccgtgcagcaagctaggacgaacc
ctgaggagccctttcatgaagttcgtagcccacgcggtgtcttttaccatcttcctggga
ctgctagttgtgaatgcatccgaccggtttgagggtgttaagactttgcccaacgagacc
ttcacagactaccccaaacagatcttcagagtgaaaaccacgcagttctcctggacggag
atgctcatcatgaagtgggtcttaggaatgatctggtctgaatgcaaggagatctgggag
gaggggccgcgggagtacgtgctgcacttgtggaacctactggatttcggcatgttgtcc
gtcttcgtggcctccttcaccgcgaggttcatggctttcctcaaggccagtgaggcccag
ctgtacgtggaccagtacgtgcaggatgtaacgctgcacaacgtctcacttccgccggaa
gtggcatacttcacctacgccagggacaagtggtggccttcagacccccagatcatctcg
gaagggctgtacgccatcgctgttgtactcagcttctcccggattgcctatatcctgcca
gccaatgagagcttcgggcccttgcagatctccctggggagaactgtgaaagacatcttc
aagttcatggtcatctttatcatggtgtttgtggccttcatgatcgggatgttcaacctg
tactcctactaccgaggtgcaaagtacaaccccgcgtttacaacagttgaagagagcttt
aaaaccctgttttggtccatatttggcttgtctgaggtcatctcggtggtgctgaagtac
gaccacaagttcatcgagaacatcggctacgtgctgtacggcgtttataatgtcaccatg
gtggttgtgctgctcaacatgctgatagccatgatcaacaactcctatcaggaaatcgag
gaagacgcagacgtggagtggaaatttgctcgagccaagctctggctttcctactttgat
gaaggaagaactctccctgctccctttaacctggtgccgagtcctaaatccttttattat
ctcataatgagaatcaagatgtgcctcataaagctctgcaaatctaaggccaaacgctgt
gaaaacgacctggaaatgggcatgctgaactccaaattcaggaagactcgctaccaggcc
ggcatgaggaattctgaaaacctgacagctaacagcaccttcagcaagcccaccagatac
cagaagatcatgaagcgtctcattaagagatacgtgctgaaggcccaggtggaccgggag
aatgatgaagtcaacgaaggtgaactcaaagagatcaagcaagacatctcaagccttcgc
tatgagctcctggaggagaagtctcaagctaccggagagctggcagacctgatccaacag
ctcagtgagaagtttggaaagaatttgaacaaagaccacctgagggtgaacaagggcaag
gacatttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (26)   

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