KEGG   Rattus norvegicus (rat): 282845
Entry
282845            CDS       T01003                                 
Symbol
Rnf34
Name
(RefSeq) E3 ubiquitin-protein ligase RNF34
  KO
K20804  E3 ubiquitin-protein ligase RNF34 [EC:2.3.2.31]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    282845 (Rnf34)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.31  RBR-type E3 ubiquitin transferase
     282845 (Rnf34)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   RBR proteins
    282845 (Rnf34)
SSDB
Motif
Pfam: zf-C3HC4_3 FYVE_CARP1-2 ARMET_C Prok-RING_4 zf-C3HC4_2 RR_TM4-6 zf-RING_5 Utp14 Sporozoite_P67
Other DBs
NCBI-GeneID: 282845
NCBI-ProteinID: NP_001004075
RGD: 628636
Ensembl: ENSRNOG00000001331
UniProt: Q6AYH3 A6J174
Position
12:complement(39364461..39385391)
AA seq 381 aa
MKAGATSMWASCCGLLNEVMGTGAVRGQQAGFPGSTGPFRFTPSSDFPTYPPAATEGPNI
VCKACGLSFSVFRKKHVCCDCKKDFCSLCSVSQENLRRCSTCHLLQETAFQRPQLMRLKV
KDLRQYLLLRNVPTDTCREKEDLVDLVLCHRGLGSGDGLDSRSLSSSRSQTSSFFTQSYF
SNYTPPSATVSSFQGELMDREGTFRSEVLTQVQSELASANTDDEDGEEDDDDDDDDDDED
DDEQEENLEEQNPGLSKKKARASLSDLSSLEEVEGMSVRQLKEILARNFVNYSGCCEKWE
LVEKVNRLYKENEENQKSYGERMQLQDEEDDSLCRICMDAVIDCVLLECGHMVTCTKCGK
RMSECPICRQYVVRAVHVFKS
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgaaggcgggtgctacctctatgtgggcttcatgctgtggactgctgaatgaagtcatg
ggaactggagctgtcagaggccagcaggcaggattcccaggaagcactggtccattcagg
tttacaccgagttctgactttcctacctacccaccagcagctacagaaggacccaatata
gtttgcaaagcctgtggactttcattttcagtctttagaaagaagcacgtctgctgtgac
tgcaagaaggacttttgctccctttgttcggtctcacaagaaaacctccgcagatgctct
acatgtcacctactccaagagacagccttccagcgccctcagttgatgagactaaaagtg
aaggacctgcggcagtatctgctcctcagaaacgtaccgaccgacacttgtcgcgagaag
gaggacttagtggatctagtgctgtgccatcgtggactgggctcgggggatggcctggac
tcaaggagtctcagttcctcaagatcccagacttctagtttttttacacaatcctatttt
tcaaattatacacccccctctgctactgtgtcctccttccagggagagctgatggacaga
gagggcaccttcaggtcagaagttctcacacaggtacaaagtgaattagcttcagcaaac
acggatgatgaggatggggaggaagatgacgacgatgatgacgatgacgacgacgaggat
gacgatgaacaagaagaaaacttagaggaacagaacccggggctctctaagaagaaggcg
agagcttccctgtccgacctgtcaagccttgaagaggtggaagggatgagcgtgcgccag
ctgaaggaaatcctggctcggaattttgtcaactattctggctgctgtgaaaagtgggag
ctggtggagaaagtcaaccggctgtacaaggagaatgaggaaaaccaaaagtcatatggt
gagcggatgcaacttcaggatgaggaagacgacagcctgtgccgaatctgcatggatgcg
gtcattgactgtgtcctgctggagtgtgggcacatggtcacctgcaccaagtgcggcaag
cgcatgagtgagtgtcccatctgcaggcagtatgtggttcgagctgtgcatgttttcaag
tcctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (9)   
   RefSeq(nuc) (5)   
   GenBank (2)   
   EMBL (2)   
Protein domain (9)   
   Pfam (9)   
All databases (37)   

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