KEGG   Rattus norvegicus (rat): 286932
Entry
286932            CDS       T01003                                 
Symbol
Vps54
Name
(RefSeq) vacuolar protein sorting-associated protein 54
  KO
K17600  vacuolar protein sorting-associated protein 54
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rno01009]
    286932 (Vps54)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    286932 (Vps54)
Protein phosphatases and associated proteins [BR:rno01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     286932 (Vps54)
Membrane trafficking [BR:rno04131]
 Endosome - Golgi transport
  Tethering complex
   GARP complex
    286932 (Vps54)
SSDB
Motif
Pfam: Vps54 Vps54_N EXOC6_Sec15_N SBP_bac_6
Other DBs
NCBI-GeneID: 286932
NCBI-ProteinID: NP_775170
RGD: 628718
Ensembl: ENSRNOG00000007125
UniProt: Q9JMK8
Position
14:99580120..99657178
AA seq 965 aa
MASSHSSSPVPQGSSSDVFFKKEVDPTKHVRPVQSLPDVCPKEPTVTDQHRWTVYHSKVN
LPAALNDPTLAKRESDFFTKTWGLDFVDTEVIPSLYLPQISKEHFIAYQQEISQREKIHE
RCKNICPPKDTFDRTLLHIHDKSRTDLEQVPKIFMKPDFALDDSLTFNSVLPWSHFNTAG
GKGNRDAASSKLLQEKLSHYLDIVEVNIAHQISLRSEAFFHAMTSQHELQDYLKKTSQAV
KMLRDKIAQIDKVMCEGSLQILRLALTRNNCVKVYNKLKLMATVHQTQPTVQVLLSTSEF
VGALDLIATTQEVLQQELQGVHSFRHLGSQLCELEKLIDKMMIAEFSTYSHSDLNRPLEG
ECQVLEEERLVSLVFGLLKQRKLNFLEIYGEEMIITAKNIIKECVINKVAQVEEIDTDAV
VKLADQMRMLNFPQWIDLLKDIFSKFTIFLQRVKATLNVIHSVVLSVLDKNQRTRELEEV
SQQRSAGKDNSLDTEVAYLTHEGLFISDAFSEAEPASAAVDTTSQRNTSPHSEPCSSDSV
SEPECTTDSSSSKEQTPASATLGGVDIIVSEDMRLTDLELGKLASNIQELLCNASDVCHD
RAVKFLMSRAKDGFLEKLNSTEFIALSRLMETFIVDTEQICGRKSTSLLGALQSQANKFV
NRFHEERRTKLSLLLDNERWKQADVPAEFQDLVDSIADGKIALPDKKPAATEDRKPADVL
VVEGHQYAVVGTVLLLIRIILEYCQCVDNIPSVTTDMLTRLTDLLKYFNSRSCQLVLGAG
ALQVVGLKTITTKNLALSSRCLQLIVHYIPVIRAHFEARLPPKQWSLLRHFDHITKDYHD
HIDEISSKLVAIMDSLFDKLLSKYEVKAPVPSPCFRNICKQMTKMHEAIFDLLPEEQTQM
LFLRINASYKFHLKKQLSHLNVINDGGPQNGLVTADVAFYTGNLQALKGLKDLDLNMAEI
WEQKR
NT seq 2898 nt   +upstreamnt  +downstreamnt
atggcttcaagccacagttcttctccagtgcctcaaggaagcagcagtgatgttttcttt
aaaaaagaggtagatccgacaaagcacgtccgacctgtgcagtcactgccagacgtgtgt
cccaaggagcccacagttacagatcaacatagatggactgtgtatcattccaaagtaaat
ctcccagcagcattaaatgatcctacgttagcaaaaagagaatcggacttcttcacaaaa
acttggggattggactttgtggacactgaagtcataccttcactctacctcccacagatc
agcaaggaacattttatagcatatcagcaggagatctctcagagagagaagattcatgag
agatgcaagaatatttgtcctcctaaagatacctttgacaggactcttttacatattcat
gataaatccaggacagatctggagcaagtacctaagatttttatgaaaccagattttgcc
ttggatgattctttaacttttaattcagttttaccatggtctcattttaatactgctggt
ggaaaaggaaatcgtgatgcagcttcttccaagttgcttcaagaaaagctgagccattat
ctggatattgtggaagtcaacattgctcaccagatctctctgcgttcagaagcatttttt
catgcaatgacctctcaacacgaattgcaggactacctcaagaaaacttcccaggctgta
aaaatgcttcgagataaaattgcacagattgataaagttatgtgtgaaggatcactacag
attttaagactggcacttaccagaaataattgtgttaaagtatacaataaactgaagttg
atggccactgtacaccaaactcagcccacagtgcaggtgctgctgtccacttctgagttc
gtcggcgcgctggacttaatagcaacgactcaagaggttctgcagcaggagctgcagggc
gttcacagcttccggcatttgggatcacagctttgtgaattagaaaagctgattgataaa
atgatgattgcagagttttctacttattctcatagtgacttaaacagaccgctggaaggg
gaatgccaagttttagaagaggaaagattagtatctctagtgtttgggcttttgaaacaa
agaaaacttaattttttagaaatctatggtgaagaaatgattattacagcaaagaacatc
attaaagagtgtgtgattaataaagttgcacaagtagaagaaatagacacagatgctgtt
gtgaagcttgcagatcaaatgagaatgctgaattttccccagtggattgatctgttaaag
gatattttctctaagtttacaattttcctacagagagttaaggcaacactgaatgtcatc
cacagtgttgttctctcagttcttgacaaaaaccaaaggactagagaattggaggaggtc
tcacagcagaggagtgctgggaaggacaactccttggacacagaggtggcttacctgacg
cacgaaggcctgttcataagtgacgctttcagtgaggctgagccagcgtccgcggcagtc
gatactacctctcagagaaacacgtctccacacagcgagccctgcagcagcgattcggta
tccgaaccagaatgtactactgattcctcatccagcaaggagcagacaccagcgtctgcc
actctgggaggtgtagacatcatagtcagtgaagacatgagattaactgacttggagctt
ggaaaattagcaagtaacatccaggaattattgtgtaatgcttctgacgtatgccacgat
cgagctgtcaaatttctcatgtcaagagcaaaggatggttttcttgaaaagctgaattcc
acggagttcatagcactgtcgagattaatggagacgttcatcgtggacactgagcagatt
tgtgggaggaagagcacctcactgcttggcgcccttcagagccaagcaaacaagtttgtg
aacaggtttcacgaggagaggcggaccaagctcagcctccttttagacaatgagcgttgg
aagcaggctgatgtgcccgcagaatttcaggatctagttgattctatagcagatggaaag
atcgctttacctgataaaaagccagcagctacagaagacaggaagcccgccgatgttctt
gttgtcgaggggcaccagtatgctgtcgtcggaactgtcttgctgttgataagaatcatc
cttgagtattgccagtgtgtggataacatcccctctgtcactactgacatgctcactcgc
ctgacggacttgctgaagtacttcaattcaagaagttgccagttagttcttggagctggt
gctttgcaagttgttggactaaaaacaattactacaaaaaacttggccctctcttcacgg
tgtttgcagctgattgtgcactacattcctgtgatccgggctcactttgaggcccggctg
ccccccaagcagtggagcctgcttaggcatttcgatcacatcaccaaggattaccatgac
catatagatgagatatcatctaagcttgtagccataatggatagcctatttgataagctg
ttatcaaagtatgaggtgaaagctcctgttccttccccatgtttcaggaatatttgtaag
caaatgacaaaaatgcatgaagctatatttgatcttcttcccgaagaacagacgcagatg
ttatttttaagaattaatgcaagttacaaattccacttgaaaaaacagttatcacactta
aatgtaataaatgatggaggacctcaaaatgggttggtcacagcagacgtagctttttac
actggaaatcttcaagccttaaaaggccttaaagatctggatctaaatatggcggagatc
tgggaacagaagaggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (7)   
   RefSeq(nuc) (5)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (27)   

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