KEGG   Rattus norvegicus (rat): 287098
Entry
287098            CDS       T01003                                 
Symbol
Cldn6
Name
(RefSeq) claudin-6 precursor
  KO
K06087  claudin
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04514  Cell adhesion molecules
rno04530  Tight junction
rno04670  Leukocyte transendothelial migration
rno05160  Hepatitis C
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    287098 (Cldn6)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    287098 (Cldn6)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    287098 (Cldn6)
 09160 Human Diseases
  09172 Infectious disease: viral
   05160 Hepatitis C
    287098 (Cldn6)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rno03037]
    287098 (Cldn6)
   04147 Exosome [BR:rno04147]
    287098 (Cldn6)
Cilium and associated proteins [BR:rno03037]
 Other cilia and associated proteins
  Stereociliary proteins
   287098 (Cldn6)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   287098 (Cldn6)
  Exosomal proteins of colorectal cancer cells
   287098 (Cldn6)
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 Clc-like Borrelia_P13
Other DBs
NCBI-GeneID: 287098
NCBI-ProteinID: NP_001095834
RGD: 1308837
Ensembl: ENSRNOG00000003654
UniProt: A0A8I5ZNF5 B4F7F0
Position
10:13213837..13218578
AA seq 219 aa
MASTGLQILGIVLTLLGWVNALVSCALPMWKVTAFIGNSIVVAQMVWEGLWMSCVVQSTG
QMQCKVYDSLLALPQDLQAARALCVITLLIVLLGLLLYLAGAKCTTCVEDKNSKSRLVLI
SGVIFVISGVLTLIPICWTAHAIIQDFYNPLVADAQKRELGASLYLGWAASGLLLIGGGL
LCCACSSGGTQGPSHYVARYSSPVPHSRGPSEYPSKNYV
NT seq 660 nt   +upstreamnt  +downstreamnt
atggcctctactggtctgcaaatcttggggattgtcctgaccctgcttggctgggtcaac
gccctggtgtcctgtgccctgccgatgtggaaggtgaccgccttcatcggcaacagcatc
gttgtggcccagatggtgtgggaggggctatggatgtcctgtgtggtccagagcactggt
cagatgcagtgcaaggtgtacgactcgctgctggcgctgccccaggacctgcaggctgcc
agagccctctgtgtcatcaccctcctcattgtcctgcttggcctactcctgtaccttgcc
ggagccaagtgcactacctgtgtggaagacaagaattccaagtctcgtctggtgctcatc
tctggtgtcatcttcgtcatctccggggtcctgaccctcattcccatctgctggactgcc
cacgccatcatccaggacttctacaaccccttggtcgcagacgctcaaaagcgagagcta
ggggcctccctctacctgggttgggccgcctcaggccttttgctgataggtggagggctg
ctatgctgcgcctgctcttctggagggacccagggacccagccattatgtggcccgctat
tcttcgcctgtcccacattctcggggaccctccgaatacccctccaagaattatgtctga

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