KEGG   Rattus norvegicus (rat): 287112
Entry
287112            CDS       T01003                                 
Symbol
Abca17
Name
(RefSeq) ATP-binding cassette sub-family A member 17
  KO
K05643  ATP-binding cassette, subfamily A (ABC1), member 3
Organism
rno  Rattus norvegicus (rat)
Pathway
rno02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    287112 (Abca17)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:rno02000]
    287112 (Abca17)
Transporters [BR:rno02000]
 ABC transporters, eukaryotic type
  ABCA (ABC1) subfamily
   ABCA1, 2, 3, 4, 7, 12, 13 subgroups
    287112 (Abca17)
SSDB
Motif
Pfam: ABC_tran ABC2_membrane_3 AAA_21 AAA_23 RsgA_GTPase AAA_22 AAA_15 AAA_29 MMR_HSR1 Arf DUF5663
Other DBs
NCBI-GeneID: 287112
NCBI-ProteinID: NP_001026807
RGD: 1560494
Ensembl: ENSRNOG00000039656
UniProt: E9PU17
Position
10:complement(13793810..13886718)
AA seq 1773 aa
MAPFKKLKLLLWKNFVLKKRKTLVTVLETLMPVLFSAIVLYLRLNSMPRNKANTNYPAVD
VSLLPVYFHNYPLKSKFQLVYIPSKSETLKAVTEVVEQTFAVDFEVLGFPSVSLFENYII
KDPKSFYVLVGIVFHHDFNSSNEPLPLVVKYDLRFSYVQRNSISPPRHLFFQEDIEGWCT
AFLYPPNLSQAPREFSYADGGHPGYNKEGFLAIQHAVDKAIMLHHAPKAALDMFKNLQVS
VQRFPSGSHIQDPFLVILQNEFPLLLMLSFICVELIITNSILLEKERKQKEYMYLMGLEN
WLHWVAWFITFFLSALVTVSGMTVLFCTKMNGVAVFRNSNPTLIFIFLMCFAIATIFFAF
MMSTFFQRAHVGTVIGGIVFFFTYLPYMYITFSYHQRTYSQKILSCLFSNVAMAMGVRFI
SLFEAEGTGIQWRNMGSVWGDFSFTQVLVMLLLDSFLYCLVAFLVESLFPRKIGMPKSWY
IFAKCPLWRKKSFPVIPPLLVIGDPEKTSKGDFLQDEPAGHINAIEIQHLYKVFYTGRSK
CIAVKDLSMNLYKGQITVLLGHNGAGKTTVCSVLTGLIPPSKGHAYIHGCEISKDMVRIR
KNVGWCPQHDILFDNFTVTDHLYFYGQLKGLSHQDCHEKIEEMLHTLGLEDKRNSRSKFL
SGGMKRKLAIGIALIAGSKVLILDEPTSGMDSSSRRAIWDLLQQQKGDRTVLLTTHFMDE
ADLLGDRIAILAKGELQCCGTPSFLKQKYGAGYYMTIIKTPLCDTEKLAKVIYHHIPNAI
LESRIGEEMIFTLPKKAMPRFEALFADLEQRQTELGISTFGASVTTMEEVFIRVCKLADP
STNVLTEKRPSLRHLPRNHRVPVDRIKCLHSRIFSLSSDQPIRLNTGFSLLCQQFYAMLL
KKVAFSRRNWMLVLSVQILLPLVIIMLSLSFFNFKLRKLDNVPLELTLQTYGQTIVPFFI
AENSRLDPQLSDNFVKMLVAAGQVPLRIQGSVENFLLKKAKEAPEDFDKLYVVAASFEDV
NDHTTVKALFNNQAYHSPSLALALVDNVLFKLLSGANASITTTNYPQPQTAMELSETILY
QGPKGHYLVVNFLFGIAFLSSSFSILTVGEKSIKSKNLQFLSGVSMAAFWLSALLWDLIS
FLVPTLLLVLVFFWYKEEAFAHPQSIPAVVLIMMLYGWAIIPLVYTVSFSFKTPGSGCVK
LVAMLTFLSISPVVLVTVTSEIDLGYTELSDTLDHIFLIFPGHCLGMAFSNLYYNFEIKK
FCNAKNLSDIDCNDVLEGYVVQKNIYAWESLGIGKYLTALAILGPVYITLLFLTEANAFC
ALKARLSGFFCKQKLRMLLNVTGAEDEDVLEEAENIKYHLDTLIKKSPLVVKELSKVYKE
KVPLLAVNKVSFVVKEKECFGLLGLNGAGKTSIFNMLTREQPITSGDAFVKGFNIRTDMA
KVQQWIGYCPEFDALLNFMTGREMLVMHARIRGIPECHIKTCVDMILENLLMCVYADKLV
KTYSDGNKRVLSTAIALLGEPTVILLDEPSTGMDPVARRLVWDAVGRVRESGKTIVITSH
SMEECEALCTRLAIMVQGQFKCLGSPQHLKSRFGSGYSLQAKVRRKWQQQMLEEFKAFVD
LTFPGSSLEDEHQSMVQYYLPGQNLSWAKVFGIMEQAKKDYVLEDYSISQLSLEDIFLSF
TRPVPDTKENIQQGQAALDSSLSPSNSRPISSPPSSPPSSPPSSPPSRPPSRPSQPPSRP
PSRHPSSPSQPPSRPPSRHPSSPSQPPSEPVLL
NT seq 5322 nt   +upstreamnt  +downstreamnt
atggccccgttcaagaagttaaaacttcttctctggaagaacttcgtcttaaagaagcgg
aagactctggtaactgtcctggaaacgttgatgccagtactgttttctgcaattgtattg
tatcttcgtttgaatagtatgccaagaaacaaggcaaacaccaactacccggcagtcgat
gtcagcttactgccagtatatttccacaactaccctctgaaaagtaaatttcagttggtt
tatatcccttccaagagcgaaaccttgaaagccgttactgaagtggtggagcaaaccttc
gccgttgactttgaagttctaggcttcccttcagtgtctttatttgaaaactatatcatt
aaggatcccaagtctttctacgtcctggtgggaattgtttttcaccatgacttcaatagc
agcaatgaaccgttgccacttgtggtgaagtatgacttgcgcttcagttatgtccagagg
aactctatatccccgccgaggcatctgttttttcaagaggatatagaaggctggtgcacg
gcctttctttaccctcccaatctaagccaagcaccccgggaattttcatacgccgatggg
ggacaccctggatacaacaaagaaggcttcctggcaatacagcatgccgtagacaaagcc
atcatgctgcaccatgctcccaaagcagcactggacatgtttaagaatctccaggtctcg
gtgcagagattcccatctgggtcccatatccaggaccccttcctagtgatccttcagaat
gagttccctctgctcctcatgctcagcttcatctgtgttgagctcataatcaccaattcc
atcttgttggagaaggagaggaaacagaaggaatatatgtatttgatgggactggagaac
tggctgcactgggttgcttggttcatcacgttcttcctttccgctttagttactgtttcc
ggtatgacggttctcttttgcacaaagatgaacggtgtggctgtgttcaggaacagtaac
cctaccctgatatttatttttctaatgtgttttgccatcgccacaattttctttgcattc
atgatgagcacattcttccaaagagcccacgtaggaactgtgataggcggcatcgtcttc
ttcttcacctaccttccctacatgtacatcactttcagttaccaccagcggacttactcc
cagaagatactctcttgcctcttctccaatgttgccatggcaatgggagtccggttcatc
tctctgtttgaagcggaaggcacaggcatccaatggaggaacatgggcagcgtctggggc
gacttcagcttcactcaggtgctggtgatgctcttgctggactccttcttgtactgcctg
gtagcctttttggtggagtctctcttcccaagaaagatcggaatgcctaagtcttggtac
atctttgccaagtgtcccctctggcgcaagaagtcctttccagtaataccgccactgttg
gttattggggatcctgagaaaacttctaaaggggacttcctgcaggacgagccagcaggt
cacataaacgccatcgagatccagcatctgtataaggtgttctatacaggaaggagtaaa
tgcatagctgtcaaagatctgagcatgaacctgtacaagggacagatcacagttcttctg
ggacacaatggagcaggaaaaactactgtctgctccgttctgacaggtcttattcctcct
tcaaaaggacacgcgtatatccatggctgtgagatctcgaaagacatggttcggatcagg
aagaacgtgggctggtgcccacagcatgacatcttgtttgataacttcacggtaaccgac
catctttatttctacggtcagttgaaaggcctgtctcaccaggactgtcatgagaaaata
gaggagatgctgcacaccctcgggctggaggacaagcggaactcaaggtccaagttcctg
agcggggggatgaagcgcaagctcgccatcggcatcgccctcatagcgggctctaaggta
ttgattctggacgagcccacctcaggcatggactcctcctccaggagggccatctgggac
cttcttcagcagcagaagggtgaccgcaccgtcctgctgaccactcacttcatggacgaa
gctgacctgctgggagaccgcatcgccatcttggccaagggggagctccagtgttgcggg
acaccatcattcctcaagcagaaatacggtgcagggtattacatgactataataaaaaca
cctctctgcgacactgagaagctcgctaaagttatttaccaccacattccgaatgcaatt
ttggagtcccgaattggagaagaaatgatcttcacacttcctaagaaggccatgcccagg
ttcgaagctctattcgctgacctggaacagagacagacagagctgggaatctctactttt
ggggcctccgtcaccactatggaggaagtgttcatacgagtttgtaagttggctgatccc
agcacaaatgtcttaactgagaagcgaccctctctccgtcatcttccccggaatcacaga
gttcccgttgacagaattaaatgtctccactcaaggatcttctcattgagctctgaccag
ccgataagactaaacacggggttctctctcctgtgccaacaattctatgccatgctcctg
aaaaaggtcgcgttttctcggcgcaactggatgctggtgctgtctgtgcagattctgctg
cctctggtgatcattatgttaagcctcagttttttcaacttcaaattaaggaagctggat
aacgtgcccctggagctgaccttgcaaacctatggtcagaccattgttccgttttttatt
gccgagaactcccgcctggatcctcagctttcagataactttgtaaaaatgctcgtggct
gcaggacaggttcctttgcgtattcaaggttctgtagagaacttcctactgaagaaggcc
aaggaggctcctgaggacttcgataagctctacgtagtggcagcttctttcgaagacgta
aatgaccacaccacagtgaaggcgctgttcaacaaccaggcctaccactcccccagcctg
gctctggctctggtggacaatgttctcttcaagttgctttctggtgccaatgcttccatt
accacaaccaactatcctcagcctcagacagccatggagctctcagagactatcctgtac
cagggccctaaaggacactaccttgtggtcaacttcctttttggaatagcttttctgtca
agctctttctccatcttgacggtcggagagaagagcattaagtccaagaacctccagttc
ctcagcggagtcagcatggctgcgttctggctctccgctctgctgtgggacctcatctct
ttccttgttcccactctgctgctggtgttggtgtttttttggtacaaggaagaagctttt
gcacacccccagagcatcccggcggtggtcttgataatgatgctgtacggctgggctatc
atccctttggtctacacagtcagtttctcttttaaaacccctggtagcgggtgcgtgaag
ctcgtggcaatgctcaccttcctgagcatcagccctgtggtcctcgtcactgtcacaagt
gagatagaccttggctacacagagctctcagacaccttggatcatattttcctaatattt
cctggacattgcctgggaatggccttctccaacttgtactacaactttgagataaaaaag
ttttgcaatgctaagaacttgagtgacattgactgcaatgatgttttagaaggatatgtg
gtccaaaagaacatctatgcctgggaatctctggggataggaaagtatctgacagccctg
gccatcttgggacctgtgtacatcaccctgcttttcctcactgaagccaatgcattctgt
gcactgaaagccaggctctctggcttcttttgtaagcaaaaattgaggatgctcttgaat
gtaacaggggctgaagatgaagacgttctagaagaggcagaaaacatcaagtatcatttg
gatacactgataaagaaaagtccacttgtcgttaaagaattgtcaaaggtctataaagag
aaggtgcccctgttggctgtgaacaaggtgtcctttgtcgttaaagaaaaagaatgcttt
ggccttcttggcctcaatggagctgggaagacgtccattttcaacatgctgaccagggag
cagcccatcacttcaggggatgcctttgtcaagggtttcaacatcaggactgacatggcg
aaggtgcagcagtggattggttactgtcctgagtttgatgccctgctaaacttcatgaca
ggaagagagatgcttgtcatgcatgcccgtatccggggcatccccgagtgccacatcaaa
acctgtgtggacatgatccttgagaacttactcatgtgcgtgtatgcagacaagctggtg
aagacctatagtgacggcaacaagcgcgtgctgagcaccgccatcgccctcctcggagag
cccacggtcatcctgctagacgagccatccactggcatggaccctgtggctcggcgcctg
gtgtgggatgctgtgggacgggtccgtgagtctggcaagaccatcgtcatcacctctcac
agtatggaggagtgtgaagccttatgtacccggctggccatcatggtacagggccagttc
aagtgcctgggcagcccgcagcacctcaagagcaggtttggcagcggctactccctgcag
gccaaggtccggaggaaatggcagcagcagatgctagaggagttcaaggcatttgtggac
ctgaccttcccaggcagcagtttggaggacgagcaccaaagcatggttcagtactacctg
ccgggccaaaacctcagctgggccaaggtgtttggcatcatggaacaagccaagaaggat
tacgtgttggaagattactccatcagccagttatccctggaggacatcttcctgagcttc
accagacccgtgcctgacactaaagaaaacatccaacaagggcaagctgccctagacagc
tccttatcaccctctaactctaggcctatctcaagtcctccctcaagtcctccctcaagt
cctccctcaagtcctccctcacgacctccctcacgtccttctcagcctccctcacgtcct
ccctcacgacatccctcaagtccttctcagcctccctcacgtcctccctcacgacatccc
tcaagtccttctcagcctccctcagagcctgtccttctgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (16)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (14)   
DNA sequence (17)   
   RefSeq(nuc) (15)   
   GenBank (1)   
   EMBL (1)   
Protein domain (11)   
   Pfam (11)   
All databases (54)   

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