KEGG   Rattus norvegicus (rat): 287113
Entry
287113            CDS       T01003                                 
Symbol
Rnps1
Name
(RefSeq) RNA-binding protein with serine-rich domain 1
  KO
K14325  RNA-binding protein with serine-rich domain 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03013  Nucleocytoplasmic transport
rno03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    287113 (Rnps1)
   03015 mRNA surveillance pathway
    287113 (Rnps1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    287113 (Rnps1)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     287113 (Rnps1)
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_5 RRM_3 RRM_occluded Nup35_RRM_2
Other DBs
NCBI-GeneID: 287113
NCBI-ProteinID: NP_001011890
RGD: 1307522
Ensembl: ENSRNOG00000008703
UniProt: Q6AYK1 A6HCR9
Position
10:13950151..13960396
AA seq 305 aa
MDLSGVKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGTTKESSEKDRGRD
KTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSS
SGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEI
FSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLA
PWPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSS
SNSSR
NT seq 918 nt   +upstreamnt  +downstreamnt
atggatttatcaggagtgaaaaagaagagcttgctaggagtcaaagagaataataaaaag
tccagcactagggctccttctcctaccaaacgaaaggaccgctctgatgagaagtccaag
gatcgatctaaagataaagggaccactaaagagtccagtgagaaggatcgtggcagagat
aagacccggaagagacgcagtgcttcaagcggaagcagcagcaccaggtccaggtccagc
tcaacctccagctcgggctccagcaccagcacgggctcgagcagtggctctagctcgtct
tctgcgtccagccgctcaggaagctccagcacatcccggagctccagttccagcagctcc
tccggctccccaagcccttctcggcgcagacatgacaacaggcggcgttcccgctccaaa
tccaaaccacctaaaagagatgaaaaagagaggaaaaggcggagcccttcacctaaaccc
accaaagtgcacattgggaggctcaccaggaatgtgaccaaggatcatatcatggaaata
ttttctacttacgggaaaattaaaatgattgacatgcctgtggaaaggatgcatcctcat
ctatccaaaggctatgcgtacgtggaattcgagaatccggatgaagcagagaaggcactg
aaacacatggatggaggacaaatagatggccaagagatcactgctactgcggtgttggca
ccctggcctcgtccaccgcctcggcgattcagcccacccaggagaatgcttccaccgcct
cccatgtggcgtaggtcacccccacggatgaggagaaggtctcgatccccaagacgcagg
tcccctgtgcgaaggaggtctcgatcgcctggccgccgccgccacaggagccgatccagc
tccaactcctcccgataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (26)   

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