KEGG   Rattus norvegicus (rat): 287120
Entry
287120            CDS       T01003                                 
Symbol
Tbl3
Name
(RefSeq) transducin beta-like protein 3
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    287120 (Tbl3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rno03009]
    287120 (Tbl3)
Ribosome biogenesis [BR:rno03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    287120 (Tbl3)
SSDB
Motif
Pfam: WD40 Utp13 ANAPC4_WD40 NBCH_WD40 WD40_like Ge1_WD40
Other DBs
NCBI-GeneID: 287120
NCBI-ProteinID: NP_001008278
RGD: 1305142
Ensembl: ENSRNOG00000013429
UniProt: Q5U2W5
Position
10:complement(14230660..14235873)
AA seq 800 aa
MAETAAGLCRFKANYAVERKIEPFYKGGKAQLDQTGRHLFCVCGTKVNILDVASGDLIRS
LEQEDQEDITAFDLSPDDEVLVTASRALLLAQWAWREGTVARLWKAIHTAPVASMAFDAT
STLLATGGCDGAVRVWDIVQHYGTHHFRGSPGVVHLVAFHPDPTRLLLFSSAVDTSIRVW
SLQDRSCLAVLTAHYSAVTSLSFSEDGHTMLSSGRDKICIVWDLRSYETSRTVPVFESVE
ASVLLPEEPALALGVKNSGLHFLTAGDQGILRVWEAASGQCVYTQPQMSGLRQELTHCTL
ARAAGLLLTVTADHNLLLYEARSLQLQKQFAGYSEEVLDVRFLGPNDSHIIVASNSPCLK
VFELQTLACQILHGHTDIVLALDVFRKGWLFASCAKDQSIRIWRMNKAGQVACVAQGSGH
THSVGTICCSRLKESFLVTGSQDCTVKLWPLPEALPSKNTASDGDLIPLQAQSTQRCHDK
DINSLAVSPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWNVQFSPTDQVLATAS
ADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGAQLLSSGSDGLLKLWTIKSNECVRT
LDAHEDKVWGLHCSRLDDHAITGGSDSRIILWKDVTEAEQAEEQAKREEQVIKQQELDNL
LHEKRYLRALGLAISLDRPHTVLTVIQAIRRDPEACEKLEATVLRLRRDQKEALLRFCIT
WNTNSRHCHEAQAVLGVLLRHEAPEELLAYDGVRGALEALLPYTERHFQRLSRTLQAATF
LDFLWHNMKLSPLPAAPPAL
NT seq 2403 nt   +upstreamnt  +downstreamnt
atggccgagactgcggcgggattgtgccgcttcaaagcaaactatgctgttgagcgaaag
atcgaacctttctacaagggtgggaaagcacagctggaccagactggccgtcacctcttt
tgtgtctgtggtaccaaagtcaacatcctggatgtggcctcaggagatttgattcggagc
ctggaacaggaagaccaagaggacattactgcctttgacctcagtcctgatgatgaagtt
ctagtaacagctagccgggcactgctgctagctcagtgggcctggcgagaaggcactgtc
gctcgtctgtggaaggcgatccatacagctcctgtggcctccatggcttttgatgccacc
tcgacactgttagccacaggcggctgtgatggggccgtacgtgtctgggacatcgtacaa
cactatgggacacaccacttccgaggctctcctggggtcgtgcatttggtggccttccat
ccagaccccactcgcttgctgctcttctcctcagctgtggacacctctatccgcgtgtgg
tcgctgcaggaccgctcgtgcctggctgtcctgactgcacactatagtgctgtcacttct
ctatcctttagtgaggatggtcacactatgctcagctctggccgtgacaagatctgcata
gtttgggaccttcggagctacgagacctcaaggacggtgccagtgtttgagagcgtggaa
gcctctgtgctattgcctgaagagccggcacttgcactgggtgtgaagaactcaggccta
cacttcttaacagctggtgaccaaggcatccttcgtgtgtgggaggcagcttctgggcag
tgtgtttacacccagccacaaatgtcaggcctacggcaggagctgacccattgtaccttg
gctcgtgctgctggcctgctcctcactgtcactgccgatcacaacctgctactctatgag
gcacgttccttacagttgcagaaacagtttgctggctacagcgaggaggtgttggatgtt
cggttcctgggacctaatgattcccacatcatcgtggcttctaacagcccttgcctgaag
gtgtttgagctgcagactttggcctgtcagatcctccacggtcacacagacattgtcctg
gccctggatgtgttccggaaggggtggctctttgccagctgtgccaaggatcagagtata
cgcatttggaggatgaacaaggccggccaggtggcctgtgtcgctcagggctctggccac
acacacagcgtgggcaccatttgctgttccaggctaaaagaatctttcctggtaacgggc
agtcaggactgcactgtgaagctctggcccctccctgaggctctgccctccaagaacaca
gcttcagatggtgacctcatacctctacaagcccagagcactcagcgttgccatgacaaa
gacatcaacagtttggctgtctcccccaatgacaagctgttagcaacaggctcacaggat
cgcacagctaagctctgggccttgcctcagtgccaactgttaggtgtgttttcaggccac
cggcgtggcctctggaatgtccagttctcacccacagaccaggtgctggccacagcttct
gctgatggcaccatcaagctctgggccctgcaggacttcagttgtctcaagacatttgag
gggcacgatgcttctgtactgaaggtggcctttgtgagccgtggcgcacagctgctgtct
agtggttctgatgggctcctgaagctgtggaccattaagagcaatgagtgtgtgcggacc
ctggatgctcacgaggacaaggtctgggggctgcactgcagccggctggatgatcacgcc
atcaccggcggcagtgactcccgaatcattctctggaaggacgtgacagaagctgagcag
gcagaagagcaggccaaacgggaagagcaggtgatcaagcagcaagaactggacaacctg
ctccatgagaagcgttatctccgggccctaggccttgccatctctctggaccgtcctcat
actgtgctgactgttatccaggccatccggagggatcctgaggcctgtgagaaactggaa
gccactgtactccgacttcgaagagaccagaaagaggccctgctgcgcttctgtatcacg
tggaacacgaattccagacattgccacgaagcccaggctgtgcttggtgtgctgctgcgc
catgaggctcctgaggagctgctggcctatgacggtgtgcggggtgcactggaggccttg
ctgccctacactgagcggcactttcagaggctcagcaggaccctgcaagcagccaccttc
ttggacttcctatggcacaacatgaagctctccccactccctgctgcgcccccagccctg
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (22)   

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