KEGG   Rattus norvegicus (rat): 287280
Entry
287280            CDS       T01003                                 
Symbol
Skp1
Name
(RefSeq) S-phase kinase-associated protein 1
  KO
K03094  S-phase kinase-associated protein 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03083  Polycomb repressive complex
rno04110  Cell cycle
rno04114  Oocyte meiosis
rno04120  Ubiquitin mediated proteolysis
rno04141  Protein processing in endoplasmic reticulum
rno04310  Wnt signaling pathway
rno04350  TGF-beta signaling pathway
rno04710  Circadian rhythm
rno05132  Salmonella infection
rno05170  Human immunodeficiency virus 1 infection
rno05200  Pathways in cancer
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    287280 (Skp1)
   04120 Ubiquitin mediated proteolysis
    287280 (Skp1)
  09126 Chromosome
   03083 Polycomb repressive complex
    287280 (Skp1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    287280 (Skp1)
   04350 TGF-beta signaling pathway
    287280 (Skp1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    287280 (Skp1)
   04114 Oocyte meiosis
    287280 (Skp1)
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    287280 (Skp1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    287280 (Skp1)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    287280 (Skp1)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    287280 (Skp1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    287280 (Skp1)
   04121 Ubiquitin system [BR:rno04121]
    287280 (Skp1)
   03036 Chromosome and associated proteins [BR:rno03036]
    287280 (Skp1)
Membrane trafficking [BR:rno04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    287280 (Skp1)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Adaptor protein
     287280 (Skp1)
   Cul7 complex
     287280 (Skp1)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     287280 (Skp1)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     287280 (Skp1)
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 287280
NCBI-ProteinID: NP_001007609
RGD: 1359648
Ensembl: ENSRNOG00000005828
UniProt: Q6PEC4 A6HEA2
Position
10:36898670..36917828
AA seq 163 aa
MPTIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQ
WCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTC
KTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEEK
NT seq 492 nt   +upstreamnt  +downstreamnt
atgcctacgataaagttgcagagttctgatggagagatatttgaagttgatgtagaaatt
gccaaacaatctgtgaccattaagaccatgctggaagatttgggaatggatgatgaggga
gatgatgatcctgttcctttaccaaatgttaatgcagcaattctaaaaaaggtcattcag
tggtgcacccaccacaaggatgaccctcctcctcctgaggatgatgagaacaaagagaag
cggacagatgatattcctgtttgggaccaagaattcctgaaagttgaccaaggaacactt
tttgaacttattctggctgcaaactacttagacatcaaaggtttgcttgatgtcacctgc
aagactgtggctaatatgattaaggggaaaacgcctgaggagattcgtaaaaccttcaat
atcaaaaatgactttactgaagaggaggaggcccaggtacgcaaagagaaccagtggtgt
gaagagaagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (11)   
   KEGG PATHWAY (11)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (10)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (7)   
DNA sequence (55)   
   RefSeq(nuc) (7)   
   GenBank (24)   
   EMBL (24)   
Protein domain (2)   
   Pfam (2)   
All databases (89)   

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