KEGG   Rattus norvegicus (rat): 287422
Entry
287422            CDS       T01003                                 
Symbol
Per1
Name
(RefSeq) period circadian protein homolog 1
  KO
K21944  period circadian protein 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04710  Circadian rhythm
rno04713  Circadian entrainment
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    287422 (Per1)
   04713 Circadian entrainment
    287422 (Per1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rno03400]
    287422 (Per1)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    287422 (Per1)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 287422
NCBI-ProteinID: NP_001029297
RGD: 727863
Ensembl: ENSRNOG00000007387
UniProt: Q8CHI5 A6HFN8
Position
10:54299002..54313804
AA seq 1293 aa
MSGPLEGADGGGDPRPGEPFCPGGVPSPGAPQHRPCPGPSLADDTDANSNGSSGNESNGH
ESRGASQRSSHSSSSGNGKDSALLETTESSKSTNSQSPSPPSSSIAYSLLSASSEQDNPS
TSGCSSEQSARARTQKELMTALRELKLRLPPERRGKGRSGTLATLQYALACVKQVQANQE
YYQQWSLEEGEPCAMDMSTYTLEELEHITSEYTLRNQDTFSVAVSFLTGRIVYISEQAGV
LLRCKRDVFRGARFSELLAPQDVGVFYGSTTPSRLPTWGTGTSAGSGLKDFTQEKSVFCR
IRGGPDRDPGPRYQPFRLTPYVTKIRVSDGAPAQPCCLLIAERIHSGYEAPRIPPDKRIF
TTRHTPSCLFQDVDERAAPLLGYLPQDLLGAPVLLFLHPEDRPLMLAIHKKILQLAGQPF
DHSPIRFCARNGEYVTMDTSWAGFVHPWSRKVAFVLGRHKVRTAPLNEDVFTPPVPSPAP
SLDSDIQELSEQIHRLLLQPVHSSSTTGLCGVGPLMSPGPLHSPGSSSDSNGGDAEGPGP
PAPVTFQQICKDVHLVKHQGQQLFIESRAKPPPRPRLLATGTFKAKVLPCQSPNPELEVA
PAPDQASLALAPEEPERKESSGCSYQQINCLDSILRYLESCNIPNTTKRKCASSSCTASS
ASDDDKQRAGPVPVGAKKDTSSAVLSGEGATPRKEPVVGGTLSPLALANKAESVVSVTSQ
CSFSSTIVHVGDKKPPESDIIMMEDLPGLAPGPAPSPAPSPTVAPDPAPDAYRPVGLTKA
VLSLHTQKEEQAFLSRFRDLGRLRGLDTSSVAPSAPGCHHGPIPSGRRHHCRSKAKRSRH
HQTPRPETPCYVSHPSPVPSSGPWPPPPATTPFPAVVQPYPLPVFSPRGGPQPLPPAPTS
VSPATFPSPLVTPMVALVLPNYLFPSPTSYPYGVSQAPVEGPPTPASHSPSPSLPPPPPS
PPHRPDSPLFNSRCSSPLQLNLLQLEESPRTEGGAAAGGPGSSAGPLPPSEESAEPEPRL
VEVTESSNQDALSGSSDLLELLLQEDSRSGTGSAASGSLGSGLGSGSGSGSHEGGSTSAS
ITRSSQSSHTSKYFGSIDSSEAEAGAAQARTEPGDQVIKYVLQDPIWLLMANADQHVMMT
YQVPSRDAASVLKQDRERLRAMQKQQPRFSEDQRRELGAVHSWVRKGQLPQALDVTACVD
CGSSVQDPGHSDDPLFSELDGLGLEPMEEGGGEGGGVGGGGGGVGGGGGDGGEEAQTQIG
TKGSSSQDSAMEEEEQGGSSSSPALPAEENGTS
NT seq 3882 nt   +upstreamnt  +downstreamnt
atgagcggtcccctagaaggggctgatgggggaggagaccccaggcccggagaacctttt
tgtcctggaggagttccatcccctggggccccacagcatcggccttgtccaggccctagc
ctggctgatgacactgatgcaaacagcaatggctcaagtggcaatgaatccaatggacac
gagtccaggggtgcatctcagcggagttctcacagttcatcttctggcaatggcaaggac
tcagctctgctggagaccactgagagcagcaagagtacaaactcacagagcccatcccca
cccagcagctccattgcctatagtctcctgagtgcaagctcagagcaggacaacccgtct
accagtggctgcagcagtgaacagtcagctcgagccaggacccagaaagaactcatgacc
gcacttcgggagctcaaacttcggctgccaccagagcgtcggggaaagggccgctctggg
accctggccacactccagtatgctctggcctgtgtcaagcaggtgcaggctaaccaggaa
tattaccagcagtggagcctggaggagggtgagccctgtgccatggacatgtctacttac
accctggaggaattggagcatatcacatctgaatacactctccgcaaccaggataccttc
tcggtggctgtgtccttcctgacaggccggattgtctatatttcggagcaggcaggtgtc
ttgctgcgttgcaaacgggatgtgtttcggggtgctcgcttctcagagctcctagctccc
caggatgtgggtgtcttctatggctctactacaccatctcgcctgcccacctggggcact
ggcacctctgcaggttcaggcctcaaggacttcacccaggaaaagtctgtcttctgccga
atcagaggagggcctgaccgggatccagggcctcgctaccagccattccgcctaacccca
tatgtgaccaagattcgtgtctcagatggggcccctgcacagccgtgctgcctgctcatt
gcagagcgcatccactctggttatgaagctccccggattcctcctgacaagaggatcttc
accacacggcacacaccaagttgcctcttccaggatgtagatgaaagggctgccccactg
ctgggttacctaccccaggatctcctgggggctccggtacttctctttctacatcctgag
gaccgacctctcatgctggccattcataagaagattctgcagttggcaggccagcccttt
gaccactcccctattcgattttgtgctcggaatggggaatatgtcaccatggataccagc
tgggccggctttgtgcacccctggagccgcaaggtggctttcgtgctgggccgccataaa
gtgcgcacggcacccctgaatgaggacgtcttcacacccccagttcccagtccagctccg
tccctggactctgatatccaggagctctcagagcagatccatcgattgctgctgcagcca
gtgcacagctccagcaccacggggctctgtggagttggccctctgatgtcccctggtcct
ctccacagccctggctcctccagtgatagcaatgggggtgatgctgaggggcctgggcct
cctgctccagtgactttccagcagatctgtaaggatgtgcatctggtaaagcaccaggga
caacagctcttcattgagtcccgggccaagcctccgccccggccccgcctccttgctaca
ggtacattcaaggccaaagtccttccctgccagtccccaaacccggaactggaggtggcc
cctgctcctgaccaagcctcattagcattggcccctgaggagccagagaggaaagagtcc
tctggctgctcctaccagcaaatcaactgcctggacagcatcctcaggtatttggaaagc
tgcaacattcctaacacaaccaagcgtaaatgtgcctcctcttcctgcacggcctcttca
gcctctgatgatgacaagcagagggcgggtccagttcctgtgggggccaagaaagatacg
tcgtcagcagtgctgtctggggagggggcaactcctcggaaggagccagtggtgggaggc
accctgagcccgctcgccctggccaataaggcagagagcgtggtgtccgtcaccagtcag
tgtagcttcagctccaccatcgtccatgtgggagacaagaagcccccggagtcggacatc
atcatgatggaagacctgcctggcctggcccctggtccagcccccagtccagcccccagc
cccacagtagcccctgacccagccccagatgcttatcgcccagtgggtctgaccaaggcc
gtgctgtccctgcacacccagaaggaagagcaagccttcctcagccgcttcagagacctc
ggcaggcttcgtgggcttgacacctcttctgtggcgccttcagcccctggttgccaccat
ggccccattccctctggtcgccgacaccactgccgatctaaagcaaagcgttctcgccac
caccagaccccccgacccgaaaccccctgctatgtgtctcatccttcacctgtgccctct
tctggaccctggccacccccaccagccactacccccttcccagcagtggtccagccctac
ccactcccagtgttctcccctcgaggaggaccccagccgcttcctcctgcccccacatct
gtgtcacctgctaccttcccttctcccttagtgaccccaatggtggccttggtgctccct
aactatttattcccttccccaactagttacccatatggggtatcccaggctcctgttgag
gggccacctacacctgcttcccactcaccttctccatccctacccccaccacctcccagc
cccccccaccgcccagactccccactgttcaactcaagatgcagttccccactccagctc
aatctgctgcagcttgaggagtccccccgcactgaagggggtgctgctgcaggaggcccc
ggaagtagtgctgggcccctgcctcccagtgaggagtctgctgagccagagcccagactg
gtggaggtcacggagtcatccaatcaggatgcactttcaggctccagtgacctgctagag
ttactgctccaggaggactctcgctctggcacaggctccgcagcctcgggctccctgggc
tccggcctgggctctgggtctggttcgggatcccacgaagggggaagcacctcagccagc
atcactcgcagcagtcagagcagccatacaagcaagtactttggcagcatcgactcttca
gaggctgaagctggagctgctcaggccaggactgagcctggggaccaggtcattaagtat
gtgctccaggatcccatctggctgctcatggccaacgctgaccagcatgtcatgatgacc
taccaggtgccgtccagggatgcagcgtctgtgctgaagcaagaccgggagaggctccgg
gccatgcagaaacaacagccacggttctcagaggaccagcggcgggaactgggtgctgtg
cactcctgggtccggaagggccagctgcctcaggccctcgatgtaacggcttgtgtggac
tgtggtagcagtgttcaagatcctggccactcggacgaccctctcttctcagaactggat
ggattggggctggagcctatggaagagggtggaggcgagggaggtggtgttggcgggggt
ggaggtggtgttggcgggggtgggggtgatggtggtgaggaggcccagacccaaattggg
actaagggctcaagctctcaggactctgccatggaggaagaagaacaaggtgggagctct
tccagtccagctttacctgcagaagagaatggcaccagctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (13)   
   RefSeq(nuc) (3)   
   GenBank (5)   
   EMBL (5)   
Protein domain (5)   
   Pfam (5)   
All databases (35)   

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