KEGG   Rattus norvegicus (rat): 287436
Entry
287436            CDS       T01003                                 
Symbol
Eif4a1
Name
(RefSeq) eukaryotic initiation factor 4A-I
  KO
K03257  translation initiation factor 4A
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    287436 (Eif4a1)
   03012 Translation factors [BR:rno03012]
    287436 (Eif4a1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    287436 (Eif4a1)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     287436 (Eif4a1)
   mRNA cycle factors
    Stress granule specific factors
     287436 (Eif4a1)
Translation factors [BR:rno03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    287436 (Eif4a1)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   287436 (Eif4a1)
  Exosomal proteins of bladder cancer cells
   287436 (Eif4a1)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_22 UvrD-helicase Flavi_DEAD AAA_30 Helicase_RecD
Other DBs
NCBI-GeneID: 287436
NCBI-ProteinID: NP_955404
RGD: 735141
Ensembl: ENSRNOG00000030628
UniProt: A0A8I6A0E5 Q6P3V8
Position
10:complement(54883093..54888602)
AA seq 406 aa
MSASQDSRSRDNGPDGMEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQ
RAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVV
MALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFV
LDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEE
LTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVS
AMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRI
GRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI
NT seq 1221 nt   +upstreamnt  +downstreamnt
atgtctgcgagtcaggattctcgatccagagacaatggccccgatgggatggagccggaa
ggcgtcatcgagagtaactggaatgagattgtggatagcttcgatgacatgaatctctca
gaatccctcctccgtggtatttatgcctatggttttgagaagccctctgccatccagcag
cgagctattcttccttgtatcaagggttatgatgtgattgctcaagcccagtctgggact
gggaaaacagctacatttgccatatccattctgcagcagattgaattagatctaaaggcc
actcaggctttggttctggcacccactcgtgaattggctcagcagattcaaaaggtggtt
atggcactgggagactacatgggtgcctcttgtcatgcctgtattgggggcaccaacgtg
cgtgctgaggtgcagaagctgcaaatggaagctccccatatcatcgtgggcacccctggc
cgggtgttcgatatgcttaaccggagatacctgtcacccaaatacatcaagatgttcgtc
ctggatgaagcagatgaaatgctaagccgtgggttcaaggatcagatctatgatatattc
caaaagctcaacagcaacacacaggtagttttgctgtctgccacaatgccttctgatgtc
cttgaggtgactaagaagttcatgagagaccctattcggattcttgtcaagaaggaagag
ttgaccctggagggtatccgccaattctacatcaatgtggaacgagaggagtggaagctc
gacacattgtgtgacttgtatgaaacactgaccatcacccaggcagtaatctttattaat
accagaaggaaggtggactggctcactgagaagatgcatgcccgggatttcacagtttct
gccatgcatggagatatggaccaaaaggaacgagacgtgatcatgagggagttccggtct
ggctctagcagagtattaattaccactgacctgttggccagaggcattgatgtgcagcag
gtctccctagtcatcaattatgaccttcccaccaacagggaaaactacatccacagaatt
ggtcgaggtggtcggtttggccggaaaggtgtggctattaacatggtgacagaagaagac
aagaggactcttcgagacattgagactttctacaacacctccattgaagagatgcccctc
aacgttgctgacctcatttga

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