KEGG   Rattus norvegicus (rat): 287592
Entry
287592            CDS       T01003                                 
Symbol
Tubd1
Name
(RefSeq) tubulin delta chain
  KO
K10390  tubulin delta
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    287592 (Tubd1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    287592 (Tubd1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    287592 (Tubd1)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     287592 (Tubd1)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    287592 (Tubd1)
SSDB
Motif
Pfam: Tubulin Tubulin_2 DUF6165
Other DBs
NCBI-GeneID: 287592
NCBI-ProteinID: NP_001099296
RGD: 1311967
Ensembl: ENSRNOG00000053309
UniProt: A6HHR1 A0A8I6G7A6
Position
10:71865446..71888731
AA seq 483 aa
MSIVTVQLGQCGNQIGFEVFDTLFRDSHCSQGLCSKRENEAYQASCKERFFREEENGVPV
ARAVLIDMEPKVINQTLSKAAQSGRWKYGQHTSFCQKQGSGNNWAYGYSVHGPKHEESIM
NLIQTEVEKCDSLSGFFIIMSMAGGTGSGLGAFITQKLQDQYSSSLKMNQIIWPYGTGEV
IVQNYNSILTLSHLYRSSDALLIHENDVVHKICAKRMNIKQISFRDLNRVLAHQLGSVFQ
PTHSEDSSFHYCRNPLVSGIVGPGLPHATNVCLVALYRRPMFLSTNGDLMEHLVPHPEFK
MLGVRNIPQMSAESLAYSTFTWAGLLKHLRQMLISRAKMEEGIDWQVRPPLSGLPPIGKA
SAHKEPHFNTSLANLVILRGREVHSADVGGFRDAALYTSWLEPADAFSVWKTPRPFDKYE
KSAALVSNSQLLVKPLDMVVGKAWNMFSSKAYIHQYTKFGMEEEDFLDSFTLLEQVVASY
GSL
NT seq 1452 nt   +upstreamnt  +downstreamnt
atgtcgatagtgacagtacagttggggcaatgtggcaaccagattggcttcgaagtgttt
gatactttatttagagactcacactgctcccagggactctgttccaagagagaaaacgag
gcatatcaagcatcctgcaaagaaagatttttcagagaggaagaaaatggagttccagtt
gcccgggctgttcttattgacatggaacctaaagttatcaatcaaacactatcaaaagct
gcccagtctggccgatggaaatacggtcagcacacaagcttttgtcagaaacaaggatct
gggaacaactgggcatatggttactctgtgcatggaccgaagcatgaagaatctataatg
aacttaatccaaacagaagtggagaaatgtgactctttgagtggatttttcatcataatg
agcatggctgggggaacaggatcaggactgggagccttcattacacagaagctacaagat
cagtactccagttccttgaaaatgaaccagattatatggccttacggaacgggcgaggtt
attgttcagaactacaactccatcttgactctctctcacttgtaccggtcttcagatgcc
cttctcattcatgagaatgacgttgtccataagatctgcgccaaacggatgaacatcaag
cagatctccttccgagatttaaatcgagttcttgcccaccagctggggagtgtgttccag
cctacgcactctgaggacagctcgtttcactactgcagaaatccactcgtttctggaatt
gtgggaccaggcctgcctcatgccacgaatgtttgtctggtggctctctaccgtagacct
atgtttctgtctacaaacggagacttaatggagcatttagttcctcaccctgaatttaag
atgctgggtgtccgtaacattcctcagatgtctgcggagtctctggcgtacagcacgttt
acctgggctggcctcctcaagcatttaagacagatgcttatttccagggcaaaaatggaa
gaaggtatcgactggcaggtgcggcctcctctgtccggccttccaccgattggcaaggca
tctgcccacaaggaacctcactttaacacttctctcgctaacttggtcatcctccgaggg
agagaagtgcacagtgccgacgtggggggttttagagacgcagctctctacacttcgtgg
ttggagcctgcagatgctttcagtgtctggaaaaccccacgaccctttgacaagtatgag
aaatctgcagccctggtcagcaatagccagctcctagtgaagccgctggacatggttgtg
ggcaaggcgtggaatatgttctcatccaaagcctatatccatcagtacaccaagttcgga
atggaggaggaagactttttggacagctttacattgttggaacaagttgttgccagctat
ggtagtctttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (11)   
   UniProt (2)   
   RefSeq(pep) (9)   
DNA sequence (9)   
   RefSeq(nuc) (9)   
Protein domain (3)   
   Pfam (3)   
All databases (34)   

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