KEGG   Rattus norvegicus (rat): 287645
Entry
287645            CDS       T01003                                 
Symbol
Snf8
Name
(RefSeq) vacuolar-sorting protein SNF8
  KO
K12188  ESCRT-II complex subunit VPS22
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    287645 (Snf8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    287645 (Snf8)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    287645 (Snf8)
Membrane trafficking [BR:rno04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-II complex
    287645 (Snf8)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   287645 (Snf8)
SSDB
Motif
Pfam: EAP30 EutK_C AbiEi_4 RPA_interact_C DUF4896 Plasmid_RAQPRD
Other DBs
NCBI-GeneID: 287645
NCBI-ProteinID: NP_001007805
RGD: 1310144
Ensembl: ENSRNOG00000006500
UniProt: Q5RK19 A6HIC5
Position
10:81481054..81493430
AA seq 258 aa
MHRRGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRK
NPEFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLIT
LEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAELNMDH
TVVLQLAEKNGYVTVSEIKASLKWETERARQVLEHLLKEGLAWLDLQAPGEAHYWLPALF
TDLYSQEISAEEAKEVFP
NT seq 777 nt   +upstreamnt  +downstreamnt
atgcaccggcgcggggtgggagctggcgccattgccaagaagaaactcgccgaggccaag
tataaggagcgagggactgtcttggctgaggaccagctggctcagatgtcaaaacagttg
gacatgttcaagaccaacctagaagaatttgccagcaagcacaagcaagagatccggaag
aatcctgagttccgagttcagttccaggacatgtgtgctaccattggggtggatcctctg
gcctctggaaaaggattttggtctgagatgctgggtgttggggacttctattatgaactg
ggcgtccagattattgaagtgtgcctggccctaaaacatcggaacggaggtctgataact
ctggaggagctacatcagcaggtgttaaaaggaaggggcaagtttgctcaggatgtcagc
caagacgacctgatcagggccatcaagaagctgaaagcactgggcactggatttggcatc
atccctgtgggaggaacttacctcattcagtctgttccagctgagctcaatatggatcac
actgttgtgctgcagctggccgagaaaaacggttatgtgactgtcagtgaaatcaaagcc
agtcttaaatgggagacggagcgagcacggcaagtgctggaacacctgctgaaggaagga
ctggcctggctggatctgcaggcaccaggggaggcccactactggctgccagctctcttc
acagatctctactcccaggagatatcagctgaggaggccaaagaagtctttccttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (31)   

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