KEGG   Rattus norvegicus (rat): 287710
Entry
287710            CDS       T01003                                 
Symbol
Cavin1
Name
(RefSeq) caveolae-associated protein 1
  KO
K19387  polymerase I and transcript release factor
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rno03021]
    287710 (Cavin1)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase I system
   Other transcription-related factors
    Transcription termination factors
     287710 (Cavin1)
SSDB
Motif
Pfam: PTRF_SDPR DUF1664 Nit_Regul_Hom Peptidase_M3
Other DBs
NCBI-GeneID: 287710
NCBI-ProteinID: NP_001099311
RGD: 1307685
Ensembl: ENSRNOG00000019778
UniProt: A6HJ65
Position
10:complement(86384401..86398240)
AA seq 392 aa
MEDVTLHIVERPYSGYPDASSEGPEPTPGEARATEEPSGTGSDELIKSDQVNGVLVLSLL
DKIIGAVDQIQLTQAQLEERQAEMEGAVQSIQGELSKLGKAHATTSNTVSKLLEKVRKVS
VNVKTVRGSLERQAGQIKKLEVNEAELLRRRNFKVMIYQDEVKLPAKLSVSKSLKESEAL
PEKEGDELGEGERPEEDAAAIELSSDEAVEVEEVIEESRAERIKRSGLRRVDDFKKAFSK
EKMEKTKVRTRENLEKTRLKTKENLEKTRHTLEKRMNKLGTRLVPVERREKLKTSRDKLR
KSFTPDHVVYARSKTAVYKVPPFTFHVKKIREGEVEVLKATEMVEVGPDDDEVGAERGEA
TDLLRGSSPDVHTLLEITEESDAVLVDKSDSD
NT seq 1179 nt   +upstreamnt  +downstreamnt
atggaggatgtcacgctccatatcgtcgagcggccgtattccggatatcccgatgcttcc
tccgagggcccggagcccaccccaggggaggcacgggccaccgaggagccgtcggggacc
ggttccgacgagctgatcaagtcggaccaggtaaacggtgtactggtgctgagccttctg
gataaaatcatcggcgccgttgaccagatccagctgacccaagcccagctggaagagcga
caggcagagatggagggcgctgtgcagagcatccagggagagctgagcaagctgggcaag
gcgcacgccaccaccagcaacaccgtgagcaagttgctggagaaggtgcgcaaggtcagc
gtcaacgtgaagacggtgcgaggcagcctggagcgccaggctggccagataaagaaactg
gaggtcaacgaggcggagctgctgcggcgccgcaacttcaaagtcatgatctaccaggat
gaagtcaagctgccggccaaactgagcgtcagcaagtctctgaaagagtcggaggcgctg
ccagagaaggagggcgatgagctgggcgagggcgagcggccggaggaggacgctgcggcg
atcgagctgtcgtctgacgaggcggtggaggtggaggaggtgatcgaggagtcccgcgcc
gagcgcatcaagcgcagcggcctgcggcgcgtggacgacttcaagaaggccttctccaag
gagaagatggagaagaccaaggtgcgcacgcgcgagaacctggagaagacgcgcctgaag
actaaggagaacctggagaagacgcggcacacgctggagaagcgcatgaacaagctgggc
acgcgcctggtgcccgtggagcgacgcgagaagctgaagacgtcgcgcgacaagctgcgc
aagtccttcacgcccgaccacgtggtgtacgcgcgctccaagaccgcggtctacaaggtg
ccgccctttaccttccatgtcaagaagatccgcgagggcgaggtggaggtgctgaaggcc
accgagatggtggaggtgggtcctgatgacgacgaggttggcgcggagcgcggcgaggcc
actgacctgctgcgcgggagcagccccgacgtgcacacgctgctggagatcaccgaggaa
tcggacgccgtcctggtggacaagagcgacagcgactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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