KEGG   Rattus norvegicus (rat): 287734
Entry
287734            CDS       T01003                                 
Symbol
Atxn7l3
Name
(RefSeq) ataxin-7-like protein 3 isoform X1
  KO
K11363  SAGA-associated factor 11
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rno03021]
    287734 (Atxn7l3)
   03036 Chromosome and associated proteins [BR:rno03036]
    287734 (Atxn7l3)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     287734 (Atxn7l3)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     287734 (Atxn7l3)
    SLIK complex
     287734 (Atxn7l3)
SSDB
Motif
Pfam: Sgf11 SCA7 FXMRP1_C_core zf-C2HC_2 S_100
Other DBs
NCBI-GeneID: 287734
NCBI-ProteinID: XP_008766446
RGD: 1311493
Ensembl: ENSRNOG00000020930
UniProt: D4A5H7
Position
10:complement(87742993..87750247)
AA seq 373 aa
MKMEEMSLSGLDNSKLEAIAQEIYADLVEDSCLGFCFEVHRAVKCGYFFLDDTDPDSMKD
FEIVDQPGLDIFGQVFNQWKSKECVCPNCSRSIAASRFAPHLEKCLGMGRNSSRIANRRI
ANSNNMNKSESDQEDNDDINDNDWSYGSEKKAKKRKSDKLWYLPFQNPNSPRRSKSLKHK
NGFSVCTSASNTLPLLFSSSGELSNSDPFKYSNSTGISYETLGPEELRSLLTTQCGVISE
HTKKMCTRSLRCPQHTDEQRRTVRIYFLGPSAVLPEVESSLDNDGFDMTDSQALLSRLQW
DGSSDLSPSDSGSSKTSENQGWGLGTNSSESRKTKKKKSHLSLVGTASGLGSNKKKKPKP
PAPPAPSIYEDIN
NT seq 1122 nt   +upstreamnt  +downstreamnt
atgaaaatggaggaaatgtctttgtctggcctggataacagcaaactagaggccatcgct
caggagatatatgctgacctggtcgaggattcttgtttgggattctgctttgaagtacac
cgggctgtcaagtgtggctacttcttcctggatgatacagatcctgatagcatgaaggat
tttgagatcgtggaccagcctgggttggacatctttggacaggttttcaaccagtggaag
agcaaggagtgcgtttgccccaactgcagccgcagtattgctgcctcccgctttgccccc
cacctggagaagtgcctgggaatgggccgcaacagcagccggatcgccaaccgtcggatt
gccaatagcaacaatatgaacaagtctgagagtgaccaagaagacaacgatgacatcaat
gacaatgactggtcctatggctcagagaagaaagccaagaagagaaaatcagacaagcta
tggtatctcccattccagaaccctaattcccctcgaagatccaagtctctaaaacacaaa
aatgggttctctgtctgtacctctgcatcaaacacccttccccttcttttttcttcttca
ggggaacttagcaactccgatccttttaagtatagcaactcaactgggatcagctatgag
accctggggccagaagagctgcggagcctgctcaccacacaatgtggagtaatttctgaa
cataccaagaagatgtgcacaaggtcactacgctgcccgcagcacacggatgagcagagg
cgaaccgtgcggatttatttccttgggccctcggccgttcttccagaggtagagagctcc
ttggacaatgatggctttgacatgactgacagccaggccctcctcagccggcttcagtgg
gacggttcttctgatctctcaccgtctgattcaggctcctccaagactagtgaaaatcag
ggatggggtttaggtaccaacagctctgaatcacggaaaaccaagaaaaagaaatcccat
ctgagcttggtagggactgcctctggcctgggctccaacaagaagaaaaagccaaagcca
ccggctcccccagcgcccagcatctatgaggacatcaactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (9)   
   UniProt (1)   
   RefSeq(pep) (8)   
DNA sequence (8)   
   RefSeq(nuc) (8)   
Protein domain (5)   
   Pfam (5)   
All databases (32)   

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