KEGG   Rattus norvegicus (rat): 287834
Entry
287834            CDS       T01003                                 
Symbol
Recql5
Name
(RefSeq) ATP-dependent DNA helicase Q5
  KO
K10902  ATP-dependent DNA helicase Q5 [EC:5.6.2.4]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rno03400]
    287834 (Recql5)
Enzymes [BR:rno01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     287834 (Recql5)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecQ family DNA helicases
     287834 (Recql5)
SSDB
Motif
Pfam: RecQ5 DEAD Helicase_C RecQ_Zn_bind ResIII TFIIS_M SRI KIX_2
Other DBs
NCBI-GeneID: 287834
NCBI-ProteinID: NP_001099323
RGD: 1310823
Ensembl: ENSRNOG00000005107
UniProt: D4ACP5
Position
10:complement(101625477..101664582)
AA seq 973 aa
MSARPFSTPFDRERRVRSTLKKVFGFDSFKTPLQESAIMAVVKGDKDVFVCMPTGAGKSL
CYQLPAVLAKGITIVVSPLIALIQDQVDHLLALKVQVSSLNSKLSVQERKELLSDLERDK
PRTKLLYITPEMAASASFQPTLNSLLSRNLLSYLVVDEAHCVSQWGHDFRPDYLRLGALR
SRLAHAPCVALTATATPQVQEDVFAALHLKQPVASFKTPCFRANLFYDVQFKELIPDVYG
NLRDFCLKALGQKADNGSSSGCGIVYCRTREACEQLAIELSSRGVNAKAYHAGLKASERT
QVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGRAGRDGKPSWC
RLYYSRNDRDQVSFLIRKELAKLQEKRGNKPSDKATLLAFDALVTFCEEVGCRHAAIAKY
FGDAPPACAKGCDCCQSPAAIRKKLDALEHSSSWGKTCIGPSQGDGFDPELYEGGRRGYG
GFSRYDEGSGGSGDEGRDEAHKREWNLFYQRQMSLRKGKEAKPEEFTPPGEDCPLRDASS
RKIPKLTVKAREHCLRLLEEALNSNHQAAGSTHGADLQAKAVELEHETFRSAKMVNLYKA
SVLKKVAEIHKASKDGQLYDMESSTKSCGAIAELLEPSDYDIPPTSHLYSLKPKRVGAGF
SKGPCPFQTATELLGKSQTEKLAPEAALESEQEPSGWVCDPQDGDRSKPCLGYQEEAPGS
RTNCGDPSPEKRTKGSSQGSAKARASKRQQLLATAARKDSQSITRFLRQRTECPPPAASV
PSSEDASPCGDVPGKCTEEVGAQGHLVAVFQTECPRERLSTCSLEDQSLPKGQPSPLKET
QAEKRPRPQQESQEKRAQKRLRPSTNSSALASDPSTENRVAREPCQLSAPGISLKEAADI
VVRYLTPFYKEGRFISKDLFKGFARHLSHLLAQKLSPGRSVKEEAQSLIKQFFHNRARCE
SEADWHGLCGPQR
NT seq 2922 nt   +upstreamnt  +downstreamnt
atgagcgcccgtcctttctccactcccttcgaccgggagcggcgagtccggagcaccctg
aagaaagtctttgggtttgattcttttaaaacacctttacaagagagtgcgatcatggct
gtagtgaaaggtgacaaggatgtgtttgtgtgcatgcccacaggggcagggaaatctctg
tgctatcagctccctgccgtgctggctaaagggatcaccattgtggtctctcctctcatt
gccttgattcaggaccaggtagaccacttgctggccttgaaggtacaagttagttctctg
aactcaaagctctcagtacaggagaggaaggagctgctgtctgacctggagcgagacaaa
cctcggaccaaacttctgtacatcaccccggagatggcagcttcagcctccttccagccc
accctgaattccctcctgtcccgaaacctgctctcctacttggtggtggatgaagctcat
tgcgtttcccagtggggacacgacttccggcctgactatctgcgtctgggcgccctacgt
tcccgcttagcacatgccccgtgcgtggctctgacagctacagccaccccacaggttcaa
gaggatgtgtttgctgccctgcacttgaagcagccagtggcctctttcaagactccctgt
ttccgggccaatctcttctatgatgtgcagttcaaggaactgattcctgacgtctatggc
aatctgagggacttctgccttaaggcccttggacagaaggctgataacgggtcgtcatct
ggctgtggcattgtctactgcaggactagagaagcttgtgaacaactggccattgagctc
agcagcaggggtgtgaatgccaaggcttaccatgcaggcctgaaggcttctgagagaacg
caggtacagaatgagtggatggaggagaaggtccctgtgattgtggcaaccatcagtttt
gggatgggagtggataaagctaatgtccggtttgttgctcattggaatatcgccaagtcc
atggctggctactaccaggagtctggccgtgctggcagggatggtaaaccatcttggtgc
cgcctctattactctaggaatgaccgagaccaagtcagcttccttatcaggaaggaacta
gccaaactccaggaaaagagggggaacaaaccatctgataaggctaccttgctggccttt
gatgccctggtgaccttctgtgaagaagtagggtgccgccatgccgccatcgctaagtac
tttggggatgcgccacccgcctgcgccaaaggctgtgactgttgccagagccctgcagcc
ataaggaagaagcttgatgccctggagcacagcagcagctggggcaagacctgcatcggg
ccctcgcagggggacggcttcgatcctgagctgtatgagggaggccgccggggctacggg
ggcttcagcaggtatgatgaaggttccggaggcagcggtgatgagggcagagatgaggct
cataagagagagtggaatcttttctatcagagacagatgagcctgcgcaagggcaaagag
gccaagccagaagaattcacacccccaggtgaagactgtcccctgagagatgcttcaagc
aggaagatccctaagctcacagtgaaggcccgtgagcactgcctgagacttctggaggag
gctctgaacagtaaccaccaggctgcagggtccactcacggagctgacctacaggccaag
gctgtggaactggagcatgagacattccgaagtgccaagatggtcaatctgtacaaggcc
agtgttctcaagaaggtggctgagatccacaaagcctccaaggacggtcagctctatgac
atggaaagcagcaccaagagctgtggggccatagctgagctcttggagcccagtgactat
gacatcccgccaacctcacatttgtactcgctcaaacccaagagagtaggagctggcttc
tctaaaggcccctgcccattccagacagccacagaactgttgggcaagtctcagaccgag
aagctggccccagaggctgcactggagagtgaacaggagccctcaggctgggtctgtgat
cctcaagatggagacaggagcaagccctgccttgggtaccaagaggaagctcctggaagc
aggactaattgtggggatccctcacctgagaagaggacaaaaggctcttcccagggcagt
gccaaggctagggccagcaagagacagcagctcttagccacagcagcccgcaaggactcc
cagagtatcacccgattcctccgtcagagaacagaatgcccgccacccgctgcttccgtc
cccagttcagaagatgccagcccctgtggggatgtcccagggaagtgcacagaagaagtt
ggagcccagggacatttggtggctgtatttcagactgagtgtcccagggagaggctaagc
acctgctcacttgaagaccagagcctccccaaaggtcagcctagccctctaaaggaaacc
caggcggagaagaggcccagaccacagcaggaaagccaagagaagagggctcagaagagg
cttcgcccctcaaccaactcttccgccttggccagtgaccccagcaccgagaacagagtg
gctcgcgaaccttgccagctctcagctcctggcatctccctgaaagaggctgcagacatt
gtggtcaggtacctgacccccttctacaaggagggcaggtttatatccaaggacttgttc
aagggctttgcccgccacctctcacatttgctggctcagaagctctctcctggaaggagt
gtgaaggaagaggcccagagcctaatcaagcagttcttccacaaccgtgcccggtgcgag
agtgaagctgactggcatggcctgtgtggcccacagcgatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (7)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (8)   
   RefSeq(nuc) (6)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (34)   

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