KEGG   Rattus norvegicus (rat): 287873
Entry
287873            CDS       T01003                                 
Symbol
Chmp6
Name
(RefSeq) charged multivesicular body protein 6
  KO
K12195  charged multivesicular body protein 6
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03250  Viral life cycle - HIV-1
rno04144  Endocytosis
rno04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    287873 (Chmp6)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    287873 (Chmp6)
  09143 Cell growth and death
   04217 Necroptosis
    287873 (Chmp6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    287873 (Chmp6)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    287873 (Chmp6)
Membrane trafficking [BR:rno04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    287873 (Chmp6)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   287873 (Chmp6)
  Exosomal proteins of other body fluids (saliva and urine)
   287873 (Chmp6)
SSDB
Motif
Pfam: Snf7 Peptidase_S46
Other DBs
NCBI-GeneID: 287873
NCBI-ProteinID: NP_001099326
RGD: 1565325
Ensembl: ENSRNOG00000004014
UniProt: A6HL97 D3ZDR2
Position
10:105690400..105696070
AA seq 200 aa
MGNLFGRKKQSRVTEQDRAILQLKQQRDKLRQYQKRVTQQLERERALARQLLRDGRKERA
KLLLKKKRYREQLLDRTENQISSLEAMVQSIEFTQIEMKVMEGLQVGNECLNKMHQVMSI
EEVERILDETQEAVEYQRQIDELLAGSFTQEDEDAILEELNAITQEQIELPEVPSEPLPD
TSPEAPAKARSRQAELVAAS
NT seq 603 nt   +upstreamnt  +downstreamnt
atgggcaacctgttcggtcgcaagaagcagagccgggtcactgaacaggacagggccatc
ctgcaactgaagcagcagagagacaagctgaggcagtaccagaagagggtcacgcagcag
ctggagagggaacgggctttggccaggcagctgcttcgggatggcaggaaagaacgggcc
aagctgctactcaagaagaagaggtaccgggagcaactgctcgataggacagaaaaccag
atcagcagcctggaagccatggttcagagcattgagttcacgcagatcgagatgaaggtg
atggaggggcttcaggtggggaacgaatgtctgaataagatgcaccaggtgatgtccata
gaggaggtggagaggatcctggacgagacccaggaggccgtggagtaccagcggcaaatt
gatgagctgctggcaggaagtttcacccaggaggacgaggatgccatcctggaagagctg
aatgcaatcactcaggaacaaatcgagttaccagaggttccttcggagcccctgcctgac
acaagcccagaagcccctgccaaggccagatccaggcaggcagagctggtggccgcttcg
taa

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