KEGG   Rattus norvegicus (rat): 287924
Entry
287924            CDS       T01003                                 
Symbol
Yars2
Name
(RefSeq) tyrosine--tRNA ligase, mitochondrial
  KO
K01866  tyrosyl-tRNA synthetase [EC:6.1.1.1]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    287924 (Yars2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:rno01007]
    287924 (Yars2)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rno03016]
    287924 (Yars2)
   03029 Mitochondrial biogenesis [BR:rno03029]
    287924 (Yars2)
Enzymes [BR:rno01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.1  tyrosine---tRNA ligase
     287924 (Yars2)
Amino acid related enzymes [BR:rno01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   287924 (Yars2)
Transfer RNA biogenesis [BR:rno03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    287924 (Yars2)
 Prokaryotic type
    287924 (Yars2)
Mitochondrial biogenesis [BR:rno03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    287924 (Yars2)
SSDB
Motif
Pfam: tRNA-synt_1b S4
Other DBs
NCBI-GeneID: 287924
NCBI-ProteinID: NP_001009627
RGD: 1311696
Ensembl: ENSRNOG00000025252
UniProt: Q5I0L3
Position
11:complement(98136530..98142320)
AA seq 471 aa
MAAPMLRHLCRVPQSGVWTRGPRAVRPGARGMLVAPRARGLFKEFFPESGTKTELPELFD
RRRAGSPQTVYCGFDPTGDSLHVGHLLTLLGLFHFQRAGHNVIALVGGSTALLGDPSGRT
KEREALSAECVRANARALQRGLETLAANHARLFADGRPWGTFTVLDNAAWFQKQHLMDFL
ATVGGHFRMGTLLSRLSVQSRLKSPEGMSLAEFFYQVLQAYDFYYLFRHYGCRVQLGGSD
QLGNIMSGYEFIHKLTGEDVFGITVPLITSTTGAKLGKSAGNAVWLNREKTSPFELYQFF
IRQQDDSVERYLKLFTFLPLPEIDHIMQLHVKEPEKRIAQKRLAAEVTKLVHGQEGLDSA
KRCTQALYHSSIEALEVMSDQELKELFKEASFSELVLDPGTSVIDTCRKANAIPDGPRGY
RMITEGGVSINHRQVTNPESVLVIGQHILKNGLSLLKIGKRNFYIIKWLQL
NT seq 1416 nt   +upstreamnt  +downstreamnt
atggcggcgcccatgctgagacacctgtgccgcgttccgcagtcaggggtctggacacgg
gggccgcgtgcggtgcgccctggcgcgcggggaatgttggtggcaccaagggcccgcggc
ctgttcaaggagttcttccccgagagcggcacgaagacagagctccccgaactctttgac
cgccgcagggcgggttcgccccagactgtgtactgcggtttcgaccccacgggcgattcg
ctgcacgtggggcacctgttaactttattgggtctgttccacttccagcgagccggccac
aacgtgatcgcgctcgtgggaggctccacggctctcctgggagaccccagcggccggacc
aaggagcgcgaggcgctgagcgctgagtgcgtgcgggccaacgcgcgcgccctgcagcga
gggctggagaccttggcggccaaccacgcgcgcctcttcgcggacgggcggccctggggc
actttcacggtgctcgacaatgcagcctggttccagaagcagcacctaatggattttctg
gccacggtgggcggccacttccgcatgggcactctgcttagccggctgagcgtgcagtcc
cgtctcaagagcccagagggcatgagcttggctgagttcttttaccaggtgctccaggcc
tatgacttctactaccttttccggcactatggatgccgggtccagctgggcggatcagat
cagttgggcaacatcatgtctggctacgagtttatccacaagttgactggagaagatgtg
tttggaatcactgtacctctaattacaagtacaactggagcgaagctgggaaagtctgct
ggcaacgcggtttggctaaacagagagaaaacatctccgtttgaactttaccagttcttt
atcagacagcaagatgattctgtagaaaggtacctgaagcttttcactttccttcccctc
ccagagattgatcatattatgcagctacatgtcaaagaaccagaaaagcgaattgctcag
aaacgacttgctgcagaagtaacaaagcttgttcatggacaagaaggtctggactctgcg
aaaaggtgtacacaagccctttaccatagcagcatagaggcactggaggtcatgtctgac
caagagttaaaggaattgtttaaagaagcttcattttctgaattagttcttgaccctgga
acgagtgtcatagacacatgccgtaaagcaaatgccattcctgatggtccccgagggtat
cggatgatcacagaaggtggagtcagtataaatcacagacaggtaacaaatcctgaaagt
gttttagtaattggacaacatattctcaagaatggactttccttacttaaaataggaaaa
aggaatttctacattataaaatggcttcagttgtga

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (31)   

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