KEGG   Rattus norvegicus (rat): 287954
Entry
287954            CDS       T01003                                 
Symbol
Dgcr8
Name
(RefSeq) microprocessor complex subunit DGCR8
  KO
K18419  microprocessor complex subunit DGCR8
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    287954 (Dgcr8)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     287954 (Dgcr8)
SSDB
Motif
Pfam: dsrm WW Hirudin PEGA
Other DBs
NCBI-GeneID: 287954
NCBI-ProteinID: NP_001099335
RGD: 1306365
Ensembl: ENSRNOG00000001886
UniProt: A6JSH6 D4A2G4
Position
11:96208959..96241560
AA seq 773 aa
METYESPSPLPHEPTGEAMMENRACPFQVLPHEQSPPPPLQTSSDAEVMDVGSGGDGQSE
PPADDPFNFYGASLLSKGSFSKGRLLIDPNCSGHSPRTARHAPAVRKFSPDLKLLKDVKI
SVSFTESCRSKDRKVLYTGVERSTRPECSQLLSPVCGDVHACPFGGSVGNGVGLGGESTD
KKDEENELDQEKRVEYAVLDELEDFTDNLELDEEGTGGFTANAIVQRDRVDEEALNFSYE
DDFDNDVDALLEEGLCAPKKRRMEEKYGGDSDHPSDGETSVQPMMTKIKTVLKSRGRPPT
EPLPDGWIMTFHNSGVPVYLHRESRVVTWSRPYFLGTGSIRKHDPPLSSIPCLHYKKMKD
NEEREQSCDLAPSGEVSPVKPLGRSAELDFPLEEPDSLGGDSGSLDEKDPLGAEAAAGAL
GQVRAKVEVCKDESVDLEEFRNYLEKRFDFEQVTVKKFRTWAERRQFNREMKRKQAESER
PILPANQKLITLSVQDAPTKKEFVINPNGKSEVCILHEYMQRVLKVRPVYNFFECENPSE
PFGASVTIDGVTYGSGTASSKKLAKNKAARATLEILIPDFVKQTSEEKPKDSEELEYFNH
ISIEDSRVYELTSKAGLLSPYQILHECLKRNHGMGDTSIKFEVVPGKNQKSEYVMACGKH
TVRGWCKNKRVGKQLASQKILQLLHPHVKNWGSLLRMYGRESSKMVKQETSDKSVIELQQ
YAKKNRPNLHILSKLQEEMKRLAAEREETRKKPKMSIVASAQPGGEPLCTVDV
NT seq 2322 nt   +upstreamnt  +downstreamnt
atggagacatatgagagtccctctcctctcccgcatgagcccacaggagaagcaatgatg
gagaaccgagcttgccccttccaagtgctgccccatgaacagtctccaccacctcccctg
caaacgtccagtgatgcagaggtaatggacgttggctctggtggtgatggacagtccgaa
cctcctgccgacgacccattcaacttctacggagcttctcttctctccaaaggatccttc
tctaagggccgcctcctcatagacccgaactgtagtggccacagcccgcgcactgcccgg
cacgcacctgcggtccggaagttctcccctgaccttaagttgcttaaggatgtaaagatt
agcgtgagctttactgagagctgcaggagtaaggacaggaaggtgctgtacacaggagta
gaacgcagcactcggcctgaatgtagccagctccttagtcctgtctgcggggacgtgcat
gcttgtccctttggcgggagtgttggtaatggggtaggcctagggggtgagagtacagat
aagaaggatgaggaaaatgagctggatcaggaaaagagagtggagtatgcagtgctcgat
gagttagaagattttactgacaatttggagctagatgaagaaggaacaggcgggttcacg
gctaacgcaatcgttcaaagagacagagtggatgaagaggccttgaatttctcctatgag
gatgactttgacaatgatgtggatgctttactagaagaaggtctctgtgctcccaagaag
aggcgaatggaggaaaaatatggcggagacagtgatcatccgtctgatggagagacaagt
gtgcagccaatgatgaccaagattaaaacagtgctcaaaagtcgtggccgtccacctaca
gagccattgcctgatggatggataatgacttttcataactctggagtccctgtatacctg
cacagagagtctcgagtggtcacctggtccagaccctacttcttggggacgggaagcata
cggaaacatgatcctcctctaagcagcatcccttgtctgcattataagaaaatgaaggac
aacgaggaacgagagcaaagttgtgatcttgcccccagtggagaagtgtcacctgtcaag
cccctgggtcgctctgcagagctggatttccctctggaggagcctgactccttgggtgga
gactcagggtctctggatgagaaggaccccctgggtgctgaggcagctgctggagccctg
ggacaagtgagggctaaagttgaggtgtgcaaagatgagtcagttgatctggaggaattt
cgtaattacctggagaagcgatttgactttgagcaagtaactgtgaaaaaattcaggact
tgggctgaacgtcgtcaattcaaccgtgagatgaagcggaaacaggcagagtcagagagg
cccatcctgccagccaaccagaagctgatcactctatctgtgcaagatgcacccacaaaa
aaagagtttgtcatcaatcccaatgggaagtctgaggtttgcatcctgcacgaatacatg
cagcgtgtcctcaaggtccgccctgtttataatttctttgaatgtgagaatccaagtgag
ccttttggtgcctccgtgaccattgatggtgtgacttacggatctggaactgcaagcagc
aaaaaacttgcgaagaataaagctgcccgagctacactggaaattctcatccctgacttt
gttaaacagacctctgaggagaagcctaaagacagtgaggaactggagtattttaaccac
atcagtattgaggattcgcgagtctacgagctgacaagcaaggctgggctgttgtctcca
tatcagatcctccatgagtgccttaaaagaaaccatggcatgggtgacacatccatcaag
tttgaagtggttcctgggaaaaaccagaagagcgaatatgttatggcatgcggcaaacac
acagtgcgcgggtggtgtaagaataaacgagttgggaaacaattagcatctcagaaaatc
cttcagctgttgcacccccatgtcaagaactgggggtccttgctgcgcatgtatggtcgt
gagagcagcaaaatggtcaagcaggagacctctgacaagagtgtgatagagctacaacag
tatgccaagaagaacaggcccaaccttcacatcctgagcaagctacaagaagagatgaag
aggctggctgcagagcgggaggagactcggaagaaacccaagatgtcaattgtagcatct
gcccagcctggtggtgagcccttgtgcacagtggatgtatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (2)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (25)   

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