KEGG   Rattus norvegicus (rat): 287979
Entry
287979            CDS       T01003                                 
Symbol
Parl
Name
(RefSeq) presenilin-associated rhomboid-like protein, mitochondrial precursor
  KO
K09650  rhomboid-like protein [EC:3.4.21.105]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:rno01002]
    287979 (Parl)
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:rno03029]
    287979 (Parl)
Enzymes [BR:rno01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.21  Serine endopeptidases
    3.4.21.105  rhomboid protease
     287979 (Parl)
Peptidases and inhibitors [BR:rno01002]
 Serine peptidases
  Family S54: Rhomboid family
   287979 (Parl)
Mitochondrial biogenesis [BR:rno03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Fission and Fusion factors
    287979 (Parl)
  Mitophagy factors
   Parkin-dependent mechanism factors
    287979 (Parl)
SSDB
Motif
Pfam: Rhomboid
Other DBs
NCBI-GeneID: 287979
NCBI-ProteinID: NP_001030326
RGD: 1306191
Ensembl: ENSRNOG00000023271
UniProt: Q3B8P0 B0BMU4
Position
11:94097559..94124915
AA seq 377 aa
MALYSWVQRGWRCGQTWAPLLGGGYRELSATQARQLLGRRFNLLLQQKCGFRKAPRKVEP
RRSDTGSSGEAYKRSALIPPLEETVFYPSPYPVRTLLKPFFFTVGFTGCAFGSAAIWQYE
SLKSRVQSYFDGIKADWLDSIRPQKEGNLRKEINKWWNSLSDGQRTVTGIIAANALVFCL
WRVPSLHRTMIRYFTSNPASKVLCSPMLLSTFSHFSLFHMAANMYVLWSFSTSIVNILGQ
EQFVAVYLSAGVISNFVSYVCKVATGRYGPSLGASGAIMTVLAAVCTKIPEGRLAIIFLP
VFTFTAGNALKAIIAMDTAGMILGWKFFDHAAHLGGALFGIWYITYGHELIWKNREPLVK
IWHEIRTNGPKKGGGSK
NT seq 1134 nt   +upstreamnt  +downstreamnt
atggcgttgtatagttgggtacagcgaggctggcgctgcggtcagacgtgggcgcctctc
ttgggtggcggctaccgggagctctctgcgacccaggcccggcagctgcttggacgcagg
tttaacctacttcttcagcaaaaatgtggatttagaaaagcaccgaggaaggtggagcct
cgaaggtcagacacagggtcaagtggagaagcatacaagagaagtgccttgatcccaccc
ctggaggaaacagtcttttacccttccccctaccctgtaagaacactcctgaagcccttt
ttcttcaccgttgggttcacaggctgtgcatttggttcagctgctatttggcagtatgaa
tcactcaagtccagggttcagagttattttgatggcataaaagctgactggttggatagc
atacggccacaaaaggaaggaaacctcagaaaggagattaacaagtggtggaatagccta
agtgatggccagcggactgtgacaggtatcatagctgcgaatgccctcgtattctgctta
tggagagtgccgtccctgcatcgaaccatgatcagatactttacatccaacccagcatca
aaggttctttgttccccaatgctgctttccacgttcagtcatttctccttattccacatg
gcagctaacatgtatgttttgtggagcttctcaactagcatcgtgaacattctgggtcag
gagcagtttgtggcagtgtacctgtctgcaggtgttatttcgaattttgtcagttatgtg
tgcaaagttgccacaggaagatacggaccttcacttggtgcgtcaggcgcaatcatgact
gtgcttgcagctgtctgcaccaagatcccggaggggagactcgccatcatcttcctccct
gttttcaccttcactgcaggcaatgccttaaaagccatcattgccatggatacagctggg
atgatcctgggatggaagttttttgatcatgcagcacatcttgggggagccctctttgga
atatggtatatcacgtatggacatgaactcatttggaagaacagggagcctctagtgaaa
atctggcacgaaataaggactaatggccccaagaaaggaggtggctctaagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (17)   
   RefSeq(nuc) (5)   
   GenBank (6)   
   EMBL (6)   
Protein domain (1)   
   Pfam (1)   
All databases (38)   

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