KEGG   Rattus norvegicus (rat): 288029
Entry
288029            CDS       T01003                                 
Symbol
Lsg1
Name
(RefSeq) large subunit GTPase 1 homolog
  KO
K14539  large subunit GTPase 1 [EC:3.6.1.-]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    288029 (Lsg1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rno03009]
    288029 (Lsg1)
Ribosome biogenesis [BR:rno03009]
 Eukaryotic type
  Pre-60S particles
   GTPases
    288029 (Lsg1)
SSDB
Motif
Pfam: MMR_HSR1 RsgA_GTPase FeoB_N AIG1 cobW
Other DBs
NCBI-GeneID: 288029
NCBI-ProteinID: NP_001013439
RGD: 1309089
Ensembl: ENSRNOG00000001727
UniProt: Q5BJT6
Position
11:83648757..83673431
AA seq 655 aa
MGRRRAPGGGSLGRVLIRHQTQRSRSHRHTDSWLHTSELNDGYDWGRLNLQSVTEQSSLE
DFLATAELAGTEFVAEKLNIKFVPPEARTGLLSFEESQRIKRLHEENRQFLCIPRRPNWD
RKTSPEELKQAEKDNFLKWRRQLVRLEEEQKLILTPFERNLDFWRQLWRVIERSDIVVQI
VDARNPLLFRCEDLECYVKEIDAAKENVILINKADLLTAEQRVAWAVHFEKEGVKVIFWS
ALAETVHLNGDSKDEVNSVAGEANSSESEDSSLDGNEIPHRDLFLLSEESESDDDDSEYE
DCQEDEEEDWQTCSEEDSNPEEGQEEGGCDRDQKEHGPEDSEAQSRASPENSQMSNKSHL
VSKQELLELFKKLHTGKKVKDGQLTVGLVGYPNVGKSSTINTIMGNKKVSVSATPGHTKH
FQTLYVEPGLCLCDCPGLVMPSFVSTKAEMICSGILPIDQMRDHVPPVSLVCQNIPRRVL
EATYGINIIKPGEDEDPYRPPTSEELLTAYGCMRGFMTAHGQPDQPRSARYILKDYVRGK
LLYCHPPPGKDPVAFQHQHRQLLENKIKGEELRLQPGKTQKAKQVENVVDKTFFHQENVR
ALTKGVQAVMGYKPGSGLVTAAAASAENVPGKPWKKHGNRNKKEKSRRLYRHLDV
NT seq 1968 nt   +upstreamnt  +downstreamnt
atgggccggagaagagcgccgggtggtgggtcactgggtcgggtacttatccggcatcag
actcaacgaagccgcagtcaccgtcatactgactcctggctgcatacgagtgaactcaat
gatggttatgattggggacgtctgaatcttcagtcagtgacggaacagagctccctcgag
gactttcttgcaactgcagaacttgcagggacggagttcgtggctgagaagcttaatatt
aagtttgtgccccctgaggctagaactggactgctgtctttcgaggagagccagagaatt
aagagactccatgaagaaaacagacagttcctgtgtataccaaggagaccaaattgggac
agaaaaactagccctgaagaactgaaacaagcagagaaagataactttctaaaatggagg
cgccagcttgtccggctagaagaagaacagaagttgatattgactccctttgaacggaat
ttggacttctggcgccagctctggagggtcattgagagaagtgatattgtggtccagata
gtagatgctcggaacccgctcctgttcagatgtgaggatttggaatgttacgtgaaggag
atagatgctgccaaggagaatgtgattctgataaacaaggcagacttgttgactgctgag
cagagggttgcctgggctgtgcactttgagaaagaaggtgtgaaggttatcttctggtca
gctttggcagaaaccgttcacctaaatggtgactctaaggatgaagtaaacagtgttgct
ggagaagccaacagctctgagtctgaagactccagtttggacgggaatgaaattccacac
agagacttgttcttgcttagtgaggagtccgaaagtgacgatgacgacagtgagtatgag
gactgtcaggaggacgaggaggaagattggcagacgtgttctgaagaagatagcaatcct
gaggaggggcaggaggaagggggctgtgatcgggaccagaaggaacacggtcctgaggat
tctgaggctcagagcagagcatcaccagaaaattcacagatgagcaacaagagccatctg
gtctcgaagcaggagttactagagctcttcaagaaactccacactgggaagaaggtgaaa
gacggacagctgactgtagggctggtgggctaccctaatgttggtaagagctcaaccatc
aacaccatcatgggcaacaagaaagtatcggtgtctgccacgccaggccacaccaagcat
ttccagaccctgtacgtggagccaggcctctgtctgtgtgactgccccggcctggtgatg
ccatcttttgtgtctaccaaagcagagatgatttgcagtgggatcctccctatcgaccag
atgagagatcacgttccgcctgtatcactagtttgccagaatatcccgaggcgagtttta
gaagctacctatggcattaacattataaagcctggagaagatgaagacccctaccgacct
ccgacctcagaagagctgttgacagcttatggatgcatgcggggattcatgacagcacac
ggacagccagaccagcctcggtctgcacgatacatcctgaaggactacgtcagaggtaaa
cttctgtattgtcaccctcctcctggaaaagaccctgtggcattccagcatcaacacagg
caactcctagagaacaaaataaaaggtgaagaactgaggcttcagccaggcaaaacccaa
aaagccaaacaggttgaaaatgtagtcgacaagacttttttccatcaggagaatgtcaga
gcattgaccaaaggggtccaggctgtcatgggttacaagcccgggagtggcctggtgact
gcagctgctgcgagtgctgagaacgtacctgggaagccctggaaaaaacacggtaacaga
aacaaaaaagagaaaagccgcaggctctacaggcacctggatgtgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (10)   
   RefSeq(nuc) (2)   
   GenBank (4)   
   EMBL (4)   
Protein domain (5)   
   Pfam (5)   
All databases (29)   

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