KEGG   Rattus norvegicus (rat): 288077
Entry
288077            CDS       T01003                                 
Symbol
Hcls1
Name
(RefSeq) hematopoietic lineage cell-specific protein
  KO
K06106  cortactin
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04530  Tight junction
rno05100  Bacterial invasion of epithelial cells
rno05205  Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    288077 (Hcls1)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    288077 (Hcls1)
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    288077 (Hcls1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    288077 (Hcls1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    288077 (Hcls1)
Membrane trafficking [BR:rno04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Others
    288077 (Hcls1)
 Others
  Actin-binding proteins
   Nucleation-promoting factors (NPFs)
    288077 (Hcls1)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Others
     288077 (Hcls1)
SSDB
Motif
Pfam: HS1_rep SH3_1 SH3_9 SH3_2 TPX2
Other DBs
NCBI-GeneID: 288077
NCBI-ProteinID: NP_001011898
RGD: 1304754
Ensembl: ENSRNOG00000038881
UniProt: Q68FX4
Position
11:complement(77322873..77346333)
AA seq 476 aa
MWKSVVGHNVSVSVETQGDDWDTDPDFVNDISEKEQRWGAKTIEGSGRTEHINIHQLRNK
VSEEHDILKKRELESGPKASHGYGGRFGVERDRMDKSAVGHEYVAEVEKHSSQTDAAKGF
GGKYGVERDRADKSAVGFDYKGEVEKHASQKDYSHGFGGRYGVEKDKRDKAALGYDYKGE
TEKHESQRDYAKGFGGQYGIQKDRVDKSAVGFNEMEAPTTAYKKTTPIEAASSGARGLKA
KFESMAEEKRKREEEEKAQQMARQQQERKAMVKMSREAQQPSVPVDEPAAPAPLPKKISS
EVWPPAESHLPPQSEPVGGRREYPVPSLPTRQPPPQNPLEDNEEPPALPPRTPEGLQVVE
EPVYEAAPEPEPEPEPDYEDVGELDRPDEEAEGDYEDVLEPEDTPSLSYQAGHSAGAGGA
GISAVALYDYQGEGSDELSFDPDDVITDIEMVDEGWWRGRCHGHFGLFPANYVKLL
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgtggaagtctgtagtggggcacaatgtatcggtttccgtggagacccagggtgatgac
tgggacacagaccctgactttgtgaatgacatctctgagaaggaacaacggtggggagcc
aagaccattgagggctctggacgcacagagcatatcaacatccaccagctgaggaacaaa
gtgtccgaggagcatgacattctcaagaagagagagctggagtcggggcctaaagcctcc
catggctatgggggtcggtttggagtggaaagagaccggatggacaagagtgccgtgggc
cacgagtatgttgctgaagtggagaaacactcgtctcagactgatgccgccaaaggcttt
gggggcaaatatggagttgagagggaccgggcagacaagtcagcggtgggctttgactac
aaaggagaggtggagaagcacgcatctcagaaagattactctcatggctttggtggccgc
tacggggtagagaaggataaacgggacaaagcagctctgggatatgactacaagggagag
acggagaagcacgagtctcagcgagattatgccaagggctttggtggtcaatatggaatc
cagaaagacagagtggataagagtgctgttggcttcaatgaaatggaggccccaaccacg
gcatataagaagacaacacccatagaagctgcttccagtggtgcccgtgggctgaaggca
aaattcgagtccatggctgaggagaagaggaagcgagaagaagaagagaaggcacaacag
atggccaggcagcagcaagaacgaaaggctatggtgaagatgagccgtgaagctcagcag
ccatccgtgcctgtggacgagcccgcagcaccagccccgttgcccaagaagatctcctca
gaggtctggcctccagcagagagtcacctaccaccacagtccgagcccgtgggaggcaga
agagaataccctgtgccctccctgcccacgagacagcctccacctcagaatcccctcgag
gacaatgaggagcccccagctctgccccctaggactccagaaggcctccaggtggtagaa
gagccagtgtacgaagcagcacccgagcccgagcctgagcccgagcctgactatgaggat
gttggagagttagatcggccggatgaggaagcagagggagactatgaggatgtgctggag
cccgaggacaccccttctctatcctaccaggctggacactcagctggggctggcggtgca
gggatctctgctgtagccctttatgattaccaaggagagggaagtgatgagctgtccttt
gacccagatgatgtcatcactgacattgagatggttgatgaaggctggtggcggggccga
tgtcatggccactttggactctttcctgcaaactatgtcaagctcctctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (25)   

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